Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1716 |
Symbol | |
ID | 6492187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1668535 |
End bp | 1669776 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642741938 |
Product | major facilitator superfamily transporter |
Protein accession | YP_002045583 |
Protein GI | 194449952 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.224446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTA ATGTCTATGA GAACACCGAC AGCGAAACTA TCACCCCGCT CAACAAGCGG CGTATTTTGC CTGTTTTCCT GCTTGTCGGC CTTTACGCCG CCAGTACAGC GGCTGTGATG TCGGTACTGC CTTTTTATAT CCGCGAGATG GGCGGTTCGC CGCTTATCAT TGGAATCATC ATCGCCACTG AGGCTTTTAG CCAATTTTGT GCAGCGCCCC TGATTGGCCA CCTTTCCGAT CGCGTTGGCC GCAAGCGAAT ACTGATTGTC ACGCTGGCTA TTGCGGCGAT AAGTTTACTA TTACTCGCCA ACGCGCAATG TATCCTGTTT ATCCTGCTCG CCCGCACGCT TTTTGGCATT AGCGCCGGAA ATTTGTCAGC CGCCGCAGCC TATATTGCCG ATTGTACGCA CGTCAGAAAT CGGCGTCAGG CAATCGGTAT CCTCACAGGC TGCATTGGTT TAGGCGGTAT TGTCGGGGCA GGCGTTTCCG GGTGGCTATC GCGTATCAGT CTGGGCGCGC CGATCTACGC CGCCTTTATA CTTGTCCTTG GGTCTGCCCT GGTCGCGATT TGGGGGTTAA AAGACCCTTC CACAACATCA CGTACCACAG ATAAAATAGC GTCGTTCTCT GCCCGCGCTA TTTTAAAGAT GCCAGTCCTT CGCGTCTTAA TCATCGTAAT GCTTTGTCAT TTCTTCGCCT ATGGCATGTA CTCTTCACAA TTACCTGTTT TTCTTTCTGA CACCTTCATC TGGAATGGGC TTCCCTTTGG GCCAAAAGCG TTAAGCTACC TGTTAATGGC GGACGGGGTT ATTAATATTT TCGTTCAGCT ATTTCTGTTA GGTTGGGTGA GCCAATATTT TTCGGAGCGA AAGCTAATTA TCCTCATCTT CGCCCTTCTT TGTACTGGAT TTCTCACTGC GGGTATCGCC ACGACCATAC CAGTGCTTAT TTTTGCTATC GTTTGTATTA GCATCGCTGA TGCGCTAGCT AAACCCACTT ATCTTGCCGC CTTGTCCGTC CATGTATCGC CTGCCCGACA AGGTATCGTC ATCGGAACGG CACAGGCATT AATCGCAATC GCTGATTTTA TATCCCCCGT ATTGGGCGGA TTGGTCCTGG GTTATGCCCT GTATGGCGTC TGGATCGGTA TAGCTATCTC TGTCGCCATT ATTGGTCTGG TGACGGCAAT GATTTACCTT TCAAAAAGTT CAGTGCTAAT AGTGAAACCA GAAACAGAAT AA
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Protein sequence | MNTNVYENTD SETITPLNKR RILPVFLLVG LYAASTAAVM SVLPFYIREM GGSPLIIGII IATEAFSQFC AAPLIGHLSD RVGRKRILIV TLAIAAISLL LLANAQCILF ILLARTLFGI SAGNLSAAAA YIADCTHVRN RRQAIGILTG CIGLGGIVGA GVSGWLSRIS LGAPIYAAFI LVLGSALVAI WGLKDPSTTS RTTDKIASFS ARAILKMPVL RVLIIVMLCH FFAYGMYSSQ LPVFLSDTFI WNGLPFGPKA LSYLLMADGV INIFVQLFLL GWVSQYFSER KLIILIFALL CTGFLTAGIA TTIPVLIFAI VCISIADALA KPTYLAALSV HVSPARQGIV IGTAQALIAI ADFISPVLGG LVLGYALYGV WIGIAISVAI IGLVTAMIYL SKSSVLIVKP ETE
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