Gene SeHA_C1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1567 
Symbol 
ID6488411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1516438 
End bp1517514 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content62% 
IMG OID642741790 
Producttransposase 
Protein accessionYP_002045435 
Protein GI194449505 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.385647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC GCGTCACTCT AACCGATCGG CAGAAAGACG CGCTGTTGCG CTTGCCGACT 
TCACAGACGG ATTTGCTCAA GCACTATACG CTGAGTGATG AAGACTTTGG GCATATCAGG
CTGCGTCGGC GCGCTCACAA CAGGTTCGGC TTCGCCCTGC AATTGTGTGT CCTGCGCTAT
CCCGGCCGGG TGCTGGCTCC AGGCGAACTG ATCCCTGCAG AGGTCATCGA ATTTATCGGA
GCGCAGCTTG GCCTGGGTGC CGACGATCTC GTAGACTATG CTGCCCGCGA GGAAACACGG
CACGAGCATC TTGCCGAGTT ACGGGGGCTC TACGGCTTCC GCACCTTCTC CGGACGTGGT
GCGAGCGAGC TGAAGGAATG GTTGTTCCGA GAAGCCGAGA TGGCGGTGTC GAACGAGGAT
ATCGCCCGTC GCTTCGTAGC CGAGTGCCGA CGCACCCGCA CTGTCCTTCC CGCGACATCC
ACGATCGAGC GGCTTTGTGC CGCGGCTCTC GTCGATGCCG AGCGACGCAT CGAGACGAGG
ATCGCCAGTC GGCTGCCTAT GTCGATCCGA GAACAGTTGC TGGCATTGCT CGAGGAGACG
GCTGATGATC GGGTGACCCG TTTTGTGTGG CTGCGCCAGT TCGAGCCTGG CTCGAACTCT
TCGTCGGCCA ACCGGCTGCT CGACCGGCTC GAATATCTGC AACGCGTCGA TCTCCCCGAG
GATCTGCTTG CCGGCGTTCC TGCCCATCGG GTGACTCGTC TGCGCAGGCA GGGTGAACGG
TATTATGCCG ACGGCATGCG CGATCTCCCG GAGGACAGGC GGCTTGCGAT CTTGGCTGTT
TGCGTCTCGG AATGGCAGGC GATGTTGGCC GACGCAGTGG TCGAAACCCA CGACCGGATC
GTCGGCCGTC TCTACCGTGC TTCGGAGCGT ATTTGCCATG CAAAGGTCGC AGACGAAGCG
GGGGTGGTGC GTGACACCCT GAAATCCTTC GCCGAGATCG GGGGCGCCCT GGTCGATGCA
CAGGATGATG GCCAGCCGCT GGGCGATGTC ATCGCGAGGG CACTGTTGCA AAGTTAG
 
Protein sequence
MPRRVTLTDR QKDALLRLPT SQTDLLKHYT LSDEDFGHIR LRRRAHNRFG FALQLCVLRY 
PGRVLAPGEL IPAEVIEFIG AQLGLGADDL VDYAAREETR HEHLAELRGL YGFRTFSGRG
ASELKEWLFR EAEMAVSNED IARRFVAECR RTRTVLPATS TIERLCAAAL VDAERRIETR
IASRLPMSIR EQLLALLEET ADDRVTRFVW LRQFEPGSNS SSANRLLDRL EYLQRVDLPE
DLLAGVPAHR VTRLRRQGER YYADGMRDLP EDRRLAILAV CVSEWQAMLA DAVVETHDRI
VGRLYRASER ICHAKVADEA GVVRDTLKSF AEIGGALVDA QDDGQPLGDV IARALLQS