Gene SeHA_C1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1521 
Symbol 
ID6489196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1478599 
End bp1479237 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID642741745 
Productresponse regulator 
Protein accessionYP_002045392 
Protein GI194450616 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.000410508 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATGG GGGCAGGGAT GGCGACAATT CATCTACTGG ATGATGATAC GGCGGTCACT 
AACGCGTGCG CGTTTTTACT GGAAAGTCTG GGATATGACG TAAAATGCTG GACGCAGGGG 
GCGGATTTTT TGGCGCAGGC CAGTCTGTAT CAGGCCGGGG TCGTATTACT GGATATGCGA 
ATGCCGGTAC TGGATGGGCA GGGCGTTCAT GATGCGTTGC GCCAGTGCGG AAGTACCCTG 
GCGGTTGTTT TTCTTACCGG GCATGGCGAT GTACCGATGG CCGTGGAGCA GATGAAACGC 
GGCGCCGTCG ATTTTCTGCA AAAACCGGTA TCGGTAAAAC CGCTACAGGC GGCGCTGGAG 
CGTGCGCTGA CGGTTTCATC GGCAGCGGTG GCGCGTCGTG AGATTATACT GTGTTACCAG 
CAGTTGACGC CGAAAGAGCG TGAGCTGGCC AGCCTGGTGG CAAAAGGATT TATGAACCGT 
GAAATTGCGG AAGCGATGAA TATCGCGGTG CGTACCGTAG AGGTGCACCG CGCCAGAGTC 
ATGGAAAAAA TGCAGGCCGG TAGCCTGGCG GAACTGATTA GGCGTTTCGA AAAAATGGCC 
TCGCCAGAGA CCAGAATACG AACAACGTAT GAGCCATGA
 
Protein sequence
MKMGAGMATI HLLDDDTAVT NACAFLLESL GYDVKCWTQG ADFLAQASLY QAGVVLLDMR 
MPVLDGQGVH DALRQCGSTL AVVFLTGHGD VPMAVEQMKR GAVDFLQKPV SVKPLQAALE 
RALTVSSAAV ARREIILCYQ QLTPKERELA SLVAKGFMNR EIAEAMNIAV RTVEVHRARV 
MEKMQAGSLA ELIRRFEKMA SPETRIRTTY EP