Gene SeHA_C1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1380 
Symbol 
ID6490132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1348359 
End bp1348949 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID642741614 
ProductABC transporter ATP-binding protein 
Protein accessionYP_002045262 
Protein GI194449963 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.397211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGCT GCCGCGACCT CGTTATTCGT CAGGGCGGGA AAGTCTTATG GCAGAACCTG 
ACGTTTACGA TTTCTGCCGG TGAACGGGTA GGAATTCATG CGCCAAGCGG AACGGGGAAA
ACAACGTTGG GGCGCGTCCT GGCCGGATGG CAAAAGCCGA CGGCGGGCGA CGTTCTGCTG
GACGGCAGCC CGTTACCCCT GCATCAGTAT TGTCCGGTAC AGCTTGTTCC CCAGCATCCT
GAACTGACGT TTAATCCCTG GCGAAGCGCC GGAGACGCTG TGCGTGATGC CTGGCAGCCT
GATCCGGAAA CGATGAGGCG TTTGCATGTG CAGCCCGAGT GGCTGACGCG TCGGCCAATG
CAGCTCTCAG GCGGGGAGTT GGCGCGTATT GCGATACTGC GCGCGCTTGA CCCACGAACG
CGTTTTCTGA TTGCCGACGA AATGACGGCG CAACTCGATC CGTCTATTCA AAAAGCGATA
TGGGGATACG TGCTTGAGGT GTGCCGCAGC CGTTCATTAG GGATGTTGGT GATTAGTCAT
CAGTCTGCGC TACTTGATCA AGTCTGTACC CGCCATTTAC AGGTGGAATA G
 
Protein sequence
MLSCRDLVIR QGGKVLWQNL TFTISAGERV GIHAPSGTGK TTLGRVLAGW QKPTAGDVLL 
DGSPLPLHQY CPVQLVPQHP ELTFNPWRSA GDAVRDAWQP DPETMRRLHV QPEWLTRRPM
QLSGGELARI AILRALDPRT RFLIADEMTA QLDPSIQKAI WGYVLEVCRS RSLGMLVISH
QSALLDQVCT RHLQVE