Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0540 |
Symbol | |
ID | 6490911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 538902 |
End bp | 540395 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642740806 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_002044473 |
Protein GI | 194450922 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.653123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAC GGAAATGGAG TATTTTGTTT CTGCTTGGGC TTTCTTTCGC ATCGGTATGT CAGGCAGGTG ATGATATTGA CGCGTTGTAT AGCCGTATTG CGCAGAAAGA TATTCAGGCG CTAAATGAGC TAAAAGCGTT AGCCAAAGAT AATAATGCTC AAGCGCTGGC GGAGTTGGGG TTTATTTATG AGTACGGTGT TTCAGTATCT GTGGATATTC CGCAAGCAAT AAAGTACTAC GAGCAGGCTT GTGATTTGGA CGGTGATTAT GGTTGCTTTA ATGCAGCTTA TTTCTATGAA TATGGCATCG GTACCCAAAA GGACATTACG CAAGCGAAAA CATTAGCAAA ACAGCTTAGA GAAAAAATTA ATCTATCCAA TATCAATCTC GATAAAAAGG TGAGTGAACG TATAATTGGG AGTGTTTATA GTAATAAACT TGAGGCATAT AGAGACCTTT CATTTCGTCC TCATTTTATT CAAGGCTTAA GTTTCTATTT TTATGCCCCG CAATCAGATG AGCGAAAACT GCTGAGTCGA ATAGGTTTTG ACTCATCACA TCTTGCGCGG ATAGCGATAC TCTGGGCGAG AGAGGGTGAT CCTGAGGTCG CGTATCAGAC GGCAAAACTG GTCTCTACTT TGTATTTTAA TAATGAAACG AAAACGATAG ATATTGCTGA AGCGCTGAAA TGGCTCCGAA TTTCGGCCGA GAAGGGGGAT GCCGACTCAC AGACGCTGTT AGGTTTTCTT TATGAACACG CTGGATTGGG ATTACAACCA GATGGAGAGA AAGCCAGGAA ATGGTATGAA ATGGCGGCGC AGCAAGGTAA TGGAGAAGCA TTGTATACAT TAGGTCGTAT GTACTATTCT GGCGTAATGG TTAACGTTGA TTACGATAAA GCGCTGTATT TTTTTAAAAA AGCTTATGAG AAAGAATTAC AGGCGGCCGC TGATTATTTA GCACAGATGT ATTTTAATGG CCAGAGTGTA GATGTCGATT GCCAACAATC CTGGCACTAT TACGATAACA GCTATATAAA AAAGATGACA CAACGCGATT ATCTTGATTA TTGTGAAAAA GATCGAAAGC GCCGTAATGA TTTTAGTCAG CAACTTCCTG AGCTGACATT AGAAAAATAT GCGGGATTAT TTGGCAGGAT TGATAATATT CCTCTGTGTC AGATTGGATT TGTTGTCAAT ACGAATAAGT TAATTCATGT TGCGAACTTA CGTGTGGAAT TGATATTAAA AAATGATGCT GGAGTTAGTG ACGAAAGAAT GGTCGCTTTT CCTCCTTTGG GTCTCAATAC TCTGGGTGCT GAACAGGGTA TGGGGGATTC TTTTAAGTCG ATGGGATATC TCTTGATGAA AAACGGTGAC TTGTGTGATT ACCATAAACT TACTTTCACC GTGAAGTCAG CGACGGCAAC AATCAATGGT AAAAAAGTTG ATTTACTGAA AACGGATAAT TTACATATTA TTCAGAATCG ATAA
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Protein sequence | MIKRKWSILF LLGLSFASVC QAGDDIDALY SRIAQKDIQA LNELKALAKD NNAQALAELG FIYEYGVSVS VDIPQAIKYY EQACDLDGDY GCFNAAYFYE YGIGTQKDIT QAKTLAKQLR EKINLSNINL DKKVSERIIG SVYSNKLEAY RDLSFRPHFI QGLSFYFYAP QSDERKLLSR IGFDSSHLAR IAILWAREGD PEVAYQTAKL VSTLYFNNET KTIDIAEALK WLRISAEKGD ADSQTLLGFL YEHAGLGLQP DGEKARKWYE MAAQQGNGEA LYTLGRMYYS GVMVNVDYDK ALYFFKKAYE KELQAAADYL AQMYFNGQSV DVDCQQSWHY YDNSYIKKMT QRDYLDYCEK DRKRRNDFSQ QLPELTLEKY AGLFGRIDNI PLCQIGFVVN TNKLIHVANL RVELILKNDA GVSDERMVAF PPLGLNTLGA EQGMGDSFKS MGYLLMKNGD LCDYHKLTFT VKSATATING KKVDLLKTDN LHIIQNR
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