Gene SeHA_C0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0486 
SymbolaroL 
ID6491225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp487980 
End bp488525 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content58% 
IMG OID642740754 
Productshikimate kinase II 
Protein accessionYP_002044421 
Protein GI194449032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAC CTCTTTATCT TGTTGGCCCG CGGGGCTGTG GGAAAACCAC CATCGGTATG 
GCGCTGGCGC AGGCAACCGG TTTCCGGTTT GCGGATACCG ACCGCTGGCT GCAATCGCAC 
GTGCAGATGA GCGTCGCTGA TATCGTTGAA AAAGAAGGCT GGGGAGGGTT CCGCGCCCGG 
GAAACCGCGG CCCTGGAGGC GGTAAGCGCG CCTTCGACTG TCGTGGCGAC GGGAGGCGGT 
ATTATTCTCA CGGAGTATAA CCGACGTTAT ATGCACCGTG TTGGCGTAGT GATTTATCTG 
TGCGCGCCGG TATCCACGCT GGTTAACCGG CTTGAGGCTG AACCTGAAGC GGATCTGCGC 
CCGACCCTCA CCGGCAAGCC GTTGAGCGAA GAGGTTCGGG AAGTGCTTGA GCAGCGTGAC 
GCGTTGTATC GCGAAACGGC ACATTACATT ATTGACGCGA CGAAAACGCC GGCCCAGGTC 
GTTTCTGAAA TTATTGCGGC GCTGCCGCCC TCGACGCAAC GGTTACAGGG AGATGTCTAT 
ACTTAA
 
Protein sequence
MMQPLYLVGP RGCGKTTIGM ALAQATGFRF ADTDRWLQSH VQMSVADIVE KEGWGGFRAR 
ETAALEAVSA PSTVVATGGG IILTEYNRRY MHRVGVVIYL CAPVSTLVNR LEAEPEADLR 
PTLTGKPLSE EVREVLEQRD ALYRETAHYI IDATKTPAQV VSEIIAALPP STQRLQGDVY 
T