Gene SeHA_C0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0338 
Symbol 
ID6491958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp350370 
End bp351080 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID642740614 
Productputative fimbrial protein 
Protein accessionYP_002044282 
Protein GI194451663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.610599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA AAGATACTCT TCCCGGGGTG TTTCTCTGTG TCGCTATGTT TGCATGTGGC 
CATGCCAGGG CGAATATGCT CGTTTATCCC ATGGCGGCAG AAATTAATAG TAGCCGCGAA 
GAGGCCACCT CGCTGTTCGT CTATTCTAAA TCAGATCATG TGCAATATAT TCGAACAAGA 
ATCATGCGTA TTGAACACCC TGGTATGCCA CAGGAGAAGG AGGTACCAGC AGGGAATGAT 
ATAGAGACAG GACTTGTTGT CTCCCCGGAG AAATTTGCCC TTTCCCCGGG AACAAAAAAA 
ACAATACGTG TTATCACTAC TCAGGCACCG GAAAGAGAGG AAGCCTGGCG GGTATACTTC 
GAGGCTGTTC CTGAACTGGA AGATGATCCA CAGGCAGGTG GAAAGCAAAA TTCATCCGTA 
AGTGTGAATC TTGTCTGGGG GGTGTTGCTG CGTGTTTCTC CGTCAGACCC CAGGCCTGCG 
CTGGTAACGG ACGGTCACCA CCTGCTGAAT ACGGGAAACA CACGGCTTTC TCTTATTCGG 
GCTGGCAACT GCGACACCAC ATGCCACTGG CAGAATATAG GCAAAAGTAT TTATCCCGGC 
GGGAGTGCTG ATATTCCGGC CGGAATAAAA AGTAATGCAT TTCGTGTGGA ATATCGTACG 
GGTGCAAATT CACCGGTAAT CTCTGCTGAT TTAACAGCAG CCGGAAAGTA A
 
Protein sequence
MNFKDTLPGV FLCVAMFACG HARANMLVYP MAAEINSSRE EATSLFVYSK SDHVQYIRTR 
IMRIEHPGMP QEKEVPAGND IETGLVVSPE KFALSPGTKK TIRVITTQAP EREEAWRVYF 
EAVPELEDDP QAGGKQNSSV SVNLVWGVLL RVSPSDPRPA LVTDGHHLLN TGNTRLSLIR 
AGNCDTTCHW QNIGKSIYPG GSADIPAGIK SNAFRVEYRT GANSPVISAD LTAAGK