| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0235 |
|---|
| Symbol | |
|---|
| ID | 6491493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 242998 |
|---|
| End bp | 243474 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642740514 |
|---|
| Product | fimbrial subunit |
|---|
| Protein accession | YP_002044188 |
|---|
| Protein GI | 194450942 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.318738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TGGCTTTGAT GGTGTTAATA AGCAGCAGTT TTGCCGCGCA GTCGGCTGAG
AATCTTAAGT TTCACGGTAC GTTAATATCA CCGCCGAATT GCACGATTAG CCATAATCAG
ACGATCGACG TTGAGTTCGG TAACATGCTG ATTAGTAAAA TAGATGGTAC GCGTTACGCA
CAGAATGTTC CGTATGAGAT CACCTGTGAT TCAGCGGTGC GCGACGATAC GATGACAATG
ACCCTGACAC TAAGCGGCTC TGTGACTGAT TTTAATCAGG CGGCGATAAA CACCAGCGTG
GCGGGGCTGG GGATTGAACT CAGGCAGAAC GACCAACCGT TTACGTTGGG GTCCACCATT
ACTGTAAATG AGCAGTCGGC ACCTGTTCTG AAAGCCATAC CGGTTAAAAA GAGCGGAGCC
TCGCTGACAG AAGGCGACTT CGATGCGACG GCAACATTAC AGGTGGATTA TCAGTAA
|
|---|
| Protein sequence | MKKMALMVLI SSSFAAQSAE NLKFHGTLIS PPNCTISHNQ TIDVEFGNML ISKIDGTRYA
QNVPYEITCD SAVRDDTMTM TLTLSGSVTD FNQAAINTSV AGLGIELRQN DQPFTLGSTI
TVNEQSAPVL KAIPVKKSGA SLTEGDFDAT ATLQVDYQ
|
|---|
| |