Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0211 |
Symbol | |
ID | 6487604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 217831 |
End bp | 218436 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642740490 |
Product | major fimbrial subunit |
Protein accession | YP_002044164 |
Protein GI | 194449098 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.698647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTCA GAAAATATGG CGTAGCCGCT TTTATTGCAA TGACTTTGAG TGCCGGGTCT GCAATGGCAG CAGATCCAGA TACGGGTACT ATTACTTTCC ACGGTCTGGT TTCTAACAAT ACCTGTAAAA TCTCTCTTGA TAATAAAATA GATCAAGACG GTAATGATTT TGACATTACG CTGGATACCG TTTTTGTTAA AAACTTCGCT ACCGCACTGG GTGATAACAG TACTCTGGGC GAAAAACAGT TCACTCTGAA TCTGAGCGAA TGTGATAACG CAACGGTAAA AGATGCCTCC GCGCAGTTTA ATTCCTGGGG CGGTTCCAGC TCAACATCAG GTGGTCTGTT AGTACCACCG GCTAATCTGC AAGGAGCAGC AGAAAACGTT AACCTGGTGC TGGCTAACAA CGGTAACGGC GCTACCGATC TGATCAAAAT TGACCAGACT AACAACACGC AGAAAGCCAC TATTTCCGCT GATGGCACCG GTGACCTGTT CTACCGCGTA GCCTACACCC AGGGCCAGAA GTGGAATGCA GACACCAGCC CGGTAACGGC AGGAACCGTA CAGGCACAAG TTGCCTTCAC CGTTATTTAT AACTAA
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Protein sequence | MFFRKYGVAA FIAMTLSAGS AMAADPDTGT ITFHGLVSNN TCKISLDNKI DQDGNDFDIT LDTVFVKNFA TALGDNSTLG EKQFTLNLSE CDNATVKDAS AQFNSWGGSS STSGGLLVPP ANLQGAAENV NLVLANNGNG ATDLIKIDQT NNTQKATISA DGTGDLFYRV AYTQGQKWNA DTSPVTAGTV QAQVAFTVIY N
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