| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_A0117 |
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| Symbol | |
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| ID | 6487595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011081 |
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| Strand | - |
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| Start bp | 83040 |
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| End bp | 84722 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642740278 |
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| Product | type IVB pilus formation outer membrane protein, R64 PilN family |
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| Protein accession | YP_002043952 |
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| Protein GI | 194447207 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.909577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CACACCAGCG TTCAATGAAG CTGGCGGTGC TCCCCTGCAT GATCGCCGTC
GCTCTTTCCA TCTCCGGATG TACTTTCAGC GAAATCAACA AAATGCAGAA AAAAGCACAG
GAAGACTCAG CACATGCACG GGAAAAGGTA TCAGCCCTTT CGGCCCGTAA ATCGCAGGCT
CTTACCTGGC TCGATAATCA ATGGATAAAC CCTGTTCCGG TCGCTCAGGT ATCAAGAGAG
AAAAAACAAA CAGCTCCGGC CTGCTACATC ACGCAGGCAA GAAAAGGAGA GATCACTCTG
CAGGAACTGG GGCAACGTAT TACTGCCGTA TGCGGCATCC CTGTGATCAT CACGCCTGAC
GCAGCCAATT CAACTCTTGA AGGAGGCGCT ACCCGCCAGA TGACAGGAAC ACTACCAGCA
CCAGATGAAA ATGGGCGTCT ACCGTTAAGC AGCCTGGGCA GCACAACAAT GACTACCTCC
ACTCAGCCAT TAACGCTGAA TAACCTCATG TGGCAGGGAG ATATCAATGG TCTTCTGGAT
CTGATGGCCA GCCGGAGTGG TCTGTACTGG CGCATGGATA ATGGTCGGAT TGTATTCTAT
CTGACTGAAA CCAGAACGTA TCCACTTCAT ATGCTGAACA CCAAAACCAG CAGCAGTTCC
AGTGTCAGCT CTGGCTCAAC AAGCACAATG GGGGCAACAG GAGGCCAGGA TAACTCAGCA
TCCGGTGATG CAACGTCCTC TCAGAGCACA ACCGTTGGTC AGGAATACGA TCTGTATGAA
GACATCCGGA AAACTATTGA AGCAATGCTG ACACCAGAAA AAGGCCGTTA CTGGTTATCT
GCATCGAGCT CAACGCTGAC TGTCACTGAT ACTCCAGCTG TCCAGGAAGC CGTCGCACGA
TATGTGGACG AACAAAACAG TATTATGAAC CGCCAGGTAG CCCTGAACGT ACAGGTTCTG
AGCGTCAGCA ATACCAGAAA CGAACAGTTC GGTCTGGACT GGAACCTTGT TTATAAATCG
CTACATTCCG CCGGAGCAAC GTTGAACAAT GCAAGCGGAG ATTTTACAGG CGCTACATCT
GCAGGCGTAT CAATTCTGGA TACGGCAACA GGGAATGCCG CCAAATTCAG CGGTTCCAGT
CTTCTGATTA AAGCGCTGAG TGAACAGGGC GATGTCAGTG TTGTGACTTC ACAAGAAAGC
ACTGTCACAA ACCTGACGCC GGTACCTATC CAGATGGCAG ATCAGACGGT TTACGTCGCC
CAGTCAGCAA CAACAACGAC TACGGATGTA GGAGCAACAA CAACATTAAC GCCGGGCATG
ATCACCACCG GATTCAATAT GACCCTGCTG CCTTTAATTC AGAAAACGGG CAATCTCCAG
TTGCAGATGA ATTTTAATCT GTCAGATCCC CCAACAATCC GTAGCTTTAC GTCAAAAGAC
GGAAACAGTT ACATCGAAAT GCCGTATACC AAACTGCGTT CACTGAGCCA GAAGGTCAAT
CTGAAAGAAG GGCAATCACT TGTCGTTACT GGTTTCGATC AGAACAATAC GACGACAAGT
AAAGCCGGTA CGTTTACGCC AGCAAATCCA TTATTTGGTG GTTCACAAAC CGGGAAAAAT
GAACGCAGCA CGCTTGTAAT CATCATTACC CCGACTTTCC CGTCAGGAGG CAACAATGGC
TGA
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| Protein sequence | MKKSHQRSMK LAVLPCMIAV ALSISGCTFS EINKMQKKAQ EDSAHAREKV SALSARKSQA
LTWLDNQWIN PVPVAQVSRE KKQTAPACYI TQARKGEITL QELGQRITAV CGIPVIITPD
AANSTLEGGA TRQMTGTLPA PDENGRLPLS SLGSTTMTTS TQPLTLNNLM WQGDINGLLD
LMASRSGLYW RMDNGRIVFY LTETRTYPLH MLNTKTSSSS SVSSGSTSTM GATGGQDNSA
SGDATSSQST TVGQEYDLYE DIRKTIEAML TPEKGRYWLS ASSSTLTVTD TPAVQEAVAR
YVDEQNSIMN RQVALNVQVL SVSNTRNEQF GLDWNLVYKS LHSAGATLNN ASGDFTGATS
AGVSILDTAT GNAAKFSGSS LLIKALSEQG DVSVVTSQES TVTNLTPVPI QMADQTVYVA
QSATTTTTDV GATTTLTPGM ITTGFNMTLL PLIQKTGNLQ LQMNFNLSDP PTIRSFTSKD
GNSYIEMPYT KLRSLSQKVN LKEGQSLVVT GFDQNNTTTS KAGTFTPANP LFGGSQTGKN
ERSTLVIIIT PTFPSGGNNG
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