Gene SNSL254_A4950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4950 
Symbol 
ID6484014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4819146 
End bp4819703 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content50% 
IMG OID642740160 
Productputative fimbrial subunit 
Protein accessionYP_002043834 
Protein GI194442680 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones107 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGA ACAGATTTGC TGCATTAGCC GCCCTGTTAA CGTTCACGGG TCTGGCATTA 
TGGTCGCCAT CGATCAGCGC GGCATACAAT ACCGCAGATG CCGTAGACAT TAACGTTACG
GGATTAATTT ATGCCGATCC GTGTACCGTG ACGGTCCCCG ACACGCTCTC TCTTGGACAA
TATGCCCGGG CGGATATCGC CGTGGCCGGC GGCAATACCG CCACCATTCC TTTCACCATA
AAAATGACGA ATTGCCCGGC AACGACCACA AAAGCCGCGA TTTCATTTAA CGGCGTACCT
TATCCCGATC CAAATTATGC TTCTGCGATT TATGCAAACA GCGCGGCCAA TCCGGCGCAG
GATTTAGGAT TACAGCTTTT TAACCTGGAC GGTAAAAGTC TGGTCAATCT GGCCAACAAC
GTCACTTACA CGGTGGATAT CAACAGTAAT ACCCATGAAG CCAATTTGCC TGTCGCCGCA
AGGATGTATA CCCCGTATGG AAAAGTCACG GCAGGGGATT TCACGTCCGT TGTGACGATC
ACTATCGCAT GGCAATAA
 
Protein sequence
MNMNRFAALA ALLTFTGLAL WSPSISAAYN TADAVDINVT GLIYADPCTV TVPDTLSLGQ 
YARADIAVAG GNTATIPFTI KMTNCPATTT KAAISFNGVP YPDPNYASAI YANSAANPAQ
DLGLQLFNLD GKSLVNLANN VTYTVDINSN THEANLPVAA RMYTPYGKVT AGDFTSVVTI
TIAWQ