Gene SNSL254_A4901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4901 
Symbol 
ID6485503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4774837 
End bp4775781 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content53% 
IMG OID642740112 
Producthypothetical protein 
Protein accessionYP_002043789 
Protein GI194443777 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.528257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAGC GCACGTCTCA GGAAGCTTAT GCGTTGCGTC TGGCGGCTGA CGTTTTTATC 
AACAAGAAAT TGATCTTAAC CAACGCCATC ATGCCTGCGC TTCGTGTTAA AAAGAAAGCC 
TCTGTCATAG TGGCGGCGCA TAGAATGTCT TTTCGGACAG GACGAGTCAT GCAAGAAGAG 
CAATCAATTC AACGAGCAGT AACACGGTTA TGTATTCAAT GCGGGCTGCT TTTATTGCAG 
CACGGGGCGG AAAGCGCACT GGTTGATGAG CTTTCCACCC GCCTCGGTTT GGCGCTCGGT 
ATGGATAGCG TCGAAAGCGC GATCTCCTCT AACGCCATTG TCCTGACGAC CATTAAAGAC 
GGACAATGTC TGACATCGAC ACGTAAAAAC CAGGATCGCG GCATTAATAT GCACGTCGTC 
ACGGAGGTGC AGCATATCGT TATCCTCGCG GAACATCGTC TGCTGGATTA CCAAGGCGTG 
GAAAAACGCT TTAGCCAGCT CCGCCCGCTG CGTTATCCGC GCTGGCTGGT GGCGTTTATG 
GTCGGTCTTT CCTGCTCCTG CTTTTGTAAG CTGAATAATG GCGGCTGGGA TGGCGCGGTT 
ATCACCTTTT TCGCCAGTAT GATAGCCATG TATATTCGCC AGATGCTGGC GCAGCGGCAT 
TTACATCCGC AGATCAATTT TTGCATTACC GCCTTTGTCG CTACCACGAT TTCCGGGCTG 
ATGCTCACCC TTCCCGCCTT TAGCCAGACG CCCACTATCG CCATGGCGGC GAGCGTACTG 
CTACTGGTGC CGGGCTTTCC GCTGATTAAT TCCGTCGCAG ATATGTTTAA AGGACATATT 
AATACCGGGC TGGCGCGCTG GGCTATCGCC AGCCTGTTGA CACTGGCCAC CTGTGTGGGC 
GTAGTGATGT CAATGACAGT ATGGGGGCTA CGAGGATGGG TATAA
 
Protein sequence
MTKRTSQEAY ALRLAADVFI NKKLILTNAI MPALRVKKKA SVIVAAHRMS FRTGRVMQEE 
QSIQRAVTRL CIQCGLLLLQ HGAESALVDE LSTRLGLALG MDSVESAISS NAIVLTTIKD 
GQCLTSTRKN QDRGINMHVV TEVQHIVILA EHRLLDYQGV EKRFSQLRPL RYPRWLVAFM 
VGLSCSCFCK LNNGGWDGAV ITFFASMIAM YIRQMLAQRH LHPQINFCIT AFVATTISGL 
MLTLPAFSQT PTIAMAASVL LLVPGFPLIN SVADMFKGHI NTGLARWAIA SLLTLATCVG 
VVMSMTVWGL RGWV