Gene SNSL254_A4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4878 
Symbol 
ID6485995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4747166 
End bp4749019 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content44% 
IMG OID642740089 
Producthypothetical protein 
Protein accessionYP_002043766 
Protein GI194443238 
COG category[S] Function unknown 
COG ID[COG3472] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGT TTGACACGAC GAAAATTGCT TTAAAAGATA TCCTGGGGCA GATTACTGAT 
GGACGGGTAC AGTTGCCTGA TTTCCAGAGA GGGTGGGTAT GGGATGATGA GCATGTCCGG
TCTTTGCTGG TCAGTATTGC CCGTTCTTTT CCCGTTGGTG CGGTTATGCT GCTGGAGACT
GGGGGAGAAG TTCGCTTCCA GGTGCGTCCA GTTGAAAATG TAGAATTGCA GAAAACCGAG
CCTGAGATGT TGATTCTGGA TGGCCAGCAA CGTTTAACGT CCTTGACTCA AGTCCTGATG
CTGGATACGC CCGTTAAGAC TTTTAACGAG AAAGGAAAGC AGATAGACCG TTTTTATTAT
ATTGATATTG AGGCCGCTCT GGACAATAGG CTTGATGAAG CTTTTATTTC TGTTGAAAAG
TCTAAAAAAG TAACGATGAA TTTTGGTCGT GATATAAAAA CTTTTGTTAA CTCCTTTGGA
GAAACGGTTG AAATGGATTT TTCTACCGTG CAAAAAGAGT GCGAAGCATT ATTTTTCCCT
TGTAACCAAA TTATCAACTC TGATGCATGG GAAAGTCATT TATATAAGTG CTCACAAGAA
AAGTTTTTCA CTTATATGCA GTTCCGTGAA AAAATTCTGA ATGCCTTTAG GAACTATTTG
CTGCCTGTTA TTAAATTGGG TAAATCAACT AGCAAAGAGG CCGTTTGCCT GGTGTTTGAA
AAGGTTAATA CCGGTGGTGT TCCACTATCC GTATTTGAAC TGGTGACCGC CAGTTTTGCG
GCTGATGGGT TTAATCTTCG GGATGACTGG TTTGGCAGTA ATTTGCGTCA AAAATTTGGC
CGCCGAAATG TACTGAATAA AGAAGCTATC CTACAGGGCG TAGAGCCGAC TGACTTTTTA
CAGGCTATCA GCATATTGAA TACGCTAAAA AAACGGCGTG CCGATCTGGC CGAAGGGAAG
ACAGGGAAAT CAGTTACTGC AGTAAGTGCT AAACGAGTTT CAGTATTAGC CCTTTCTCTT
GAAGATTATC ATTGCTGGGC CGACGATGTG GAAAAAGGCT TCTTACTTGC CGCTAAATTT
CTCCATCATG AATGTTTTAT GCACTCATGG GATCTTCCTT ATCGTACGCA GCTTGTGCCG
CTGGCGGCAG TATTATCGAA ATTACAAGGC AATTGGCTGG AGCCCAAAAT TTATGACAAA
CTGGCGCGCT GGTTCTGGTG CGGTGTCCTG GGGGAACTGT ACGGCGGCGC GGTAGAAACA
CGTATCGCAA ACGATGTGGA AGAGTTACTA AACTGGATTG AGGGGGAAGG TGAAGAGCCC
CGGACGATTT ATGAAGCCTC ATTCCAGCCA GGGCGTTTAT TGACGTTACG TTCCCGATTG
AGCGCCGCGT ATAAAGCGTT AAGCGTGTTG ATCCTACGCA ATGGTGCTCA AGACTTTTTC
TGGAAGTCGA CGATCCAAAA GTTAGATTAT GGTGAGATTG CACTCGATAT TCACCATATT
TTCCCAAAGA TATGGTGCGA GAATAATAAT ATTAGTCCAG CAGTGTATAA CTCTATCATT
AATAAAACAT CAATCTCCTA TAAGGCCAAC CGAATGATTG GTGGGAGATC TCCGGCTGAG
TATCTGTCGC AGATCCAGAC GCATCAGCAG GTCGGTCTGG AGGATGCCGA GATGGATGCG
ATCCTGCGTA GCCATTTTAT TGAGCCTTCG TTGTTACGGC AGGATAGTTT TGAGGCATTT
TTTGCCGATC GAAAAAAACA ATTGCTGAAA TTGATCGAAG CGGCAATGGG GAAAAATATT
AGTCAGGATG ATGTTGCTGA ATTAGAGACA GCAACAGACG AGATTGATGT CTGA
 
Protein sequence
MSTFDTTKIA LKDILGQITD GRVQLPDFQR GWVWDDEHVR SLLVSIARSF PVGAVMLLET 
GGEVRFQVRP VENVELQKTE PEMLILDGQQ RLTSLTQVLM LDTPVKTFNE KGKQIDRFYY
IDIEAALDNR LDEAFISVEK SKKVTMNFGR DIKTFVNSFG ETVEMDFSTV QKECEALFFP
CNQIINSDAW ESHLYKCSQE KFFTYMQFRE KILNAFRNYL LPVIKLGKST SKEAVCLVFE
KVNTGGVPLS VFELVTASFA ADGFNLRDDW FGSNLRQKFG RRNVLNKEAI LQGVEPTDFL
QAISILNTLK KRRADLAEGK TGKSVTAVSA KRVSVLALSL EDYHCWADDV EKGFLLAAKF
LHHECFMHSW DLPYRTQLVP LAAVLSKLQG NWLEPKIYDK LARWFWCGVL GELYGGAVET
RIANDVEELL NWIEGEGEEP RTIYEASFQP GRLLTLRSRL SAAYKALSVL ILRNGAQDFF
WKSTIQKLDY GEIALDIHHI FPKIWCENNN ISPAVYNSII NKTSISYKAN RMIGGRSPAE
YLSQIQTHQQ VGLEDAEMDA ILRSHFIEPS LLRQDSFEAF FADRKKQLLK LIEAAMGKNI
SQDDVAELET ATDEIDV