| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4626 |
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| Symbol | |
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| ID | 6486392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4510933 |
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| End bp | 4513155 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642739850 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_002043532 |
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| Protein GI | 194445798 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor
[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF
[TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.447699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATAATC TGGACATCTT CCTTCCTGAA GCCGGATTTC TGGCGCTGTT GTTGAGTCTC
GGGGTCAACG TGCTGACCCC GCTGGCGACG TGGTGCGGGA TGGGGCTGCA CTGGCGCGGC
GTCATGCGCC TGACGACCTG CGGCGCGTGG ACGGCGTTCA CGCTGCTGCT ACTGGCGTTT
GCGATTCTGG TTAGCTGTTT TCTGACCAGC GATTTTTCGG TCGTTTATGT TGCGCAGCAT
AGCCATAGTC AGTTGTCATG GGGACTGAAA CTGGCGGCGG TATGGGGCGG TCATGAAGGC
TCGCTCCTGC TGTGGGCGCT GCTTCTTTCG GGGTGGACGG TGCTATTCGC CTGGCGCTCC
CGGCATGAAT CTGACGCGCT TTTTCCGCTG ACCCTGAGCA TCTTGTCCCT CATTATGGCT
TCGCTGCTGC TATTTATTGT GCTGTGGTCC GATCCGTTCC TGCGTATTTT CCCTCCCGCC
ATGGAAGGGC GCGACCTTAA TCCCATGCTG CAACATCTGG GGCTGATCTT ACATCCGCCG
CTGCTCTATC TGGGTTATGG CGGCCTGATG ACCGCGGCGA GCGTAGCGCT GGCCTCGCTA
CTGTGCGGCG GCTTTAACGC GGCAACCGCC TGGGTGTGCT GGCGCTGGGC GTTACCCGGC
TGGTGCGCTC TGACGCTGGG TATCATTCTC GGATCGTGGT GGGCGTATTG CGAACTGGGC
TGGGGCGGCT GGTGGTTCTG GGACCCGGTG GAAAATGCCT CGTTGTTGCC GTGGCTTGCC
GCCAGCGCGT TGCTGCACAG TCTGTATGTC AGCCGCCAGC GCGGGAGCTT CCGTCACTGG
TCGTTGCTGC TGGCGATACT GACGCTGATC CTCTCGTTGC TGGGAACGCT GATTGTGCGT
TCCGGCATTC TTGTTTCGGT ACATGCCTTT GCGCTGGATA ACGTGCGCGC GGTGCCGCTG
TTTACCCTTT TTGCCGCGTT AAGTCTGGCA TCGCTTGTTC TGTACGGCTG GCGGGCGCGG
GAGCCGTATC CGGCGACGCG TTTGGGCGGC GGAAAGTGCG AAACGCTCAT TCTGGCGACG
CTGCTGCTCT TTAGCGCCGT CTTGTTGATC GTGCTGGTCG GGACGCTCTA CCCCATGATT
TATGGTTTGA TGGGCTGGGG AAGGCTTTCG GTGGGCGCGC CCTATTTTAA TCGCGTCACG
CTGCCGTTTG GCCTGCTGAT GCTGGTAGTT ATCGTGCTGG CGACAATCAG AAGCCGCAAA
GTCTCTGTGC GTTGTCAGCT TCCGGCATTG CTGGCGCATA CGGGCGTATT TATCTTCGCC
GCCGGGATCA TGGTTTCCAG CGGCAGTCGG CATGAAATCA GCCTTAACCT CAGCCCCGGT
CAGCAGGTGG TACTGGCGGG CTACATTTTC CGCTTTGAGC GTCTGGATCT GGAGGCCAAA
GGCAACTACA CCAGTGAAAA AGCGCGGATC ACGTTGTGGC GGAATGAAAA ACGCATTGGC
AGCCTGCAGC CTGAAAGGCG CTTCTATGCC GCGCGTCGTC AACAGATGAT GGAGCCGGGG
ATTCACTGGA ACCTGCTACA TGACTGGTAC GCGGTGATGG GCGAAAAAAC CGGCCCGGAT
CGTTACGCCA TGCGCTTATA CGTGCAGACC GGCGTGCGCT GGATCTGGGG AGGGGGATTG
TTGATGGTGT GTGGCGCGCT GCTGAGCGGA TGGCGGGGGA GGAAGCATCC TGAGTTATTG
CCTGATGGCG CTGCGCTTAT CAGGCCTACG AGTGAAAAGC ATGGTAGGCC GGATAAGGCG
TTTACGCCGC CATCCGGCAA GTCGATGTTA CTTGTGGCTT TTCTGATTTT TCTGCCTTTT
AGCACCCACG CCCAGGTGGT GGATACCTGG CGCTTTGACA ATCCACAACA GCAGGAAAAA
GCGCTATCTA TTGCCAGTCA ACTGCGCTGT CCGCAGTGTC AGAACCAGAA TTTGCTGGAA
TCCAATGCGC CCGTGGCGGT CAGTATGCGC CATCAGGTTT ACAGCATGGT GGCCGAAGGT
AAAAGCGAAG CGGAAATCAC CGCCTGGATG ACCGACCGTT ATGGTGATTT CGTACGCTAC
AACCCGCCGT TGAATGAGCA AACGCTGCTG TTGTGGGCGC TGCCGTACCT GCTGTTATTG
CTGGTGGGCG TGGTGGCCTG GCGGGTGAGA AAGCGTCAGC ACGCAGGAGA GGGGGAACAA
TGA
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| Protein sequence | MHNLDIFLPE AGFLALLLSL GVNVLTPLAT WCGMGLHWRG VMRLTTCGAW TAFTLLLLAF
AILVSCFLTS DFSVVYVAQH SHSQLSWGLK LAAVWGGHEG SLLLWALLLS GWTVLFAWRS
RHESDALFPL TLSILSLIMA SLLLFIVLWS DPFLRIFPPA MEGRDLNPML QHLGLILHPP
LLYLGYGGLM TAASVALASL LCGGFNAATA WVCWRWALPG WCALTLGIIL GSWWAYCELG
WGGWWFWDPV ENASLLPWLA ASALLHSLYV SRQRGSFRHW SLLLAILTLI LSLLGTLIVR
SGILVSVHAF ALDNVRAVPL FTLFAALSLA SLVLYGWRAR EPYPATRLGG GKCETLILAT
LLLFSAVLLI VLVGTLYPMI YGLMGWGRLS VGAPYFNRVT LPFGLLMLVV IVLATIRSRK
VSVRCQLPAL LAHTGVFIFA AGIMVSSGSR HEISLNLSPG QQVVLAGYIF RFERLDLEAK
GNYTSEKARI TLWRNEKRIG SLQPERRFYA ARRQQMMEPG IHWNLLHDWY AVMGEKTGPD
RYAMRLYVQT GVRWIWGGGL LMVCGALLSG WRGRKHPELL PDGAALIRPT SEKHGRPDKA
FTPPSGKSML LVAFLIFLPF STHAQVVDTW RFDNPQQQEK ALSIASQLRC PQCQNQNLLE
SNAPVAVSMR HQVYSMVAEG KSEAEITAWM TDRYGDFVRY NPPLNEQTLL LWALPYLLLL
LVGVVAWRVR KRQHAGEGEQ
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