| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4539 |
|---|
| Symbol | |
|---|
| ID | 6482395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4413986 |
|---|
| End bp | 4415101 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642739765 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002043447 |
|---|
| Protein GI | 194446311 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3948] Phage-related baseplate assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAG CCGAACCCGA CTTTATTGAC CGCGATCCCG CGCAAATCAC CAGCGAGATG
ATTGCGCAAT ATGAAGAAGC CAGCGGTAAA AAACTCTATC CGGCGCAGGC TGAGCGGCTG
CTCATTGACC TGTTTGCTTA TCGTGAAAAC CTTGTCCGCA TCGCCATCCA GGAGGCAGCG
AAGCAAAACC TGGTCGCGTA TTCCCGTGCG CCGATGCTGG ATTATTTAGG CGAGCTGGTT
GGCGTTCACC GTCTGCCCGC TCAGGCGGCA AAAACCACGC TGCAGTTTTC TGTTACTCAA
GCGGCTAAAA GTAACCTGGT GATTCCACAG GGTACCCGCG CCAGCGCGTC GGATAGCGTG
ATGTTCGCCA CCGACGAAGA TGTTCTGTTG CCTGCGGGCA GCCTGAGCGT TGCGGTAACT
GCAACCTGTG TAGCAACCGG TGAATCCGGC AATAACTGGC AACCTGCGCA AATCAGCGCG
CTGGTGGATC GGGTAGGCAA TTACGATCTC AGCGTCACCA ATCTGACGGC CTCAAGTGGC
GGCTGCGGCG AAGAGAACGA CGACGCGCTA CGTAAACGCA TCCAGCTAGC GCCGGAAAGT
TTCAGCAACG CGGGCAGCTA TGGCGCCTAT CGCTTCCATA CGCTCTCGGT CAGCCAGTCG
ATTATCGACG TGGCGGTGCT GGGGCCGGAT GAAGGGCTGG CGGAAGGCTG CGTGGAACTC
TATCCGCTGA CCCTGAACGG TCTGCCGGGG CCAGAGCTTC TTGCCCAGAT CGAACGGGAG
GTGAGCAAAG AGAAAAAGCG CCCGCTAACC GATAAGGTGA GCGCTAAATG TTCTCCGCGC
GTGGCTTATC AGATCCGCGC CCGGTTGACG CTGTTTACCA CCGCCGATCA GGAGACGACG
CTTGCCGCCG CGCGTGAAGC GATTAATACA TGGACGCGCT CGCGCCAGAC CCGGCTGGGC
CAGGACATTG TGCCAAACCA GATAATTAAA GTATTACAGG TTGACGGCGT TTACGACGTC
GCGCTGGATA TGCCTGCGAA AAAGGTACTA CAGGCGCACG AATGGGCGGA ATGCACGGCC
ATTGACGTGA CGATTGCCGG AGTCAGCGAT GGATAA
|
|---|
| Protein sequence | MAIAEPDFID RDPAQITSEM IAQYEEASGK KLYPAQAERL LIDLFAYREN LVRIAIQEAA
KQNLVAYSRA PMLDYLGELV GVHRLPAQAA KTTLQFSVTQ AAKSNLVIPQ GTRASASDSV
MFATDEDVLL PAGSLSVAVT ATCVATGESG NNWQPAQISA LVDRVGNYDL SVTNLTASSG
GCGEENDDAL RKRIQLAPES FSNAGSYGAY RFHTLSVSQS IIDVAVLGPD EGLAEGCVEL
YPLTLNGLPG PELLAQIERE VSKEKKRPLT DKVSAKCSPR VAYQIRARLT LFTTADQETT
LAAAREAINT WTRSRQTRLG QDIVPNQIIK VLQVDGVYDV ALDMPAKKVL QAHEWAECTA
IDVTIAGVSD G
|
|---|
| |