Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4437 |
Symbol | metF |
ID | 6483381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4310155 |
End bp | 4311045 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642739676 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_002043370 |
Protein GI | 194442743 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTT TTCACGCCAA CCAGCGGGAA GCCCTGAATC AGAGCCTGGC GGAAGTACAG GGTCAGATTA ACGTTTCGTT TGAATTTTTC CCGCCGCGCA ACAGTGAAAT GGAGCAAACC CTGTGGAACT CCATCGATCG CCTGAGCAGT CTGAAACCGA AGTTTGTTTC GGTAACGTAT GGCGCCAACT CCGGGGAACG CGACCGCACC CATAGCGTTA TTAAAGGCAT CAAAGAGCGT ACTGGGCTTG AGGCCGCGCC GCACCTTACC TGTATTGACG CCACGCGCGA TGAACTGCGC ACCATCGCCC GCGACTACTG GAATAACGGT ATCCGCCACA TTGTCGCTTT GCGCGGCGAT TTGCCGCCGG GCAGCGGTAA GCCGGAGATG TACGCCGCCG ATCTGGTTGG TTTGCTCAAA GAGGTGGCCG ATTTCGATAT TTCAGTAGCG GCCTATCCGG AGGTACATCC GGAAGCGAAA AGCGCGCAGG CCGATCTGCT TAATCTGAAG CGTAAAGTGG ATGCTGGCGC TAACCGCGCG ATAACCCAAT TTTTCTTCGA TGTGGAAAGC TACCTGCGTT TTCGTGACCG CTGTGTTTCC GCCGGTATCG ACGTAGAAAT TATTCCCGGC ATTTTACCGG TGTCTAACTT TAAACAGGCG AAAAAATTTG CCGATATGAC CAATGTCCGC ATTCCGTCCT GGATGTCGCT GATGTTTGAG GGGCTGGATA ATGACGCAGA AACCCGCAAG CTGGTGGGCG CTAACATTGC GATGGACATG GTGAAAATTT TAAGCCGTGA AGGAGTGAAG GATTTCCACT TCTACACGTT GAATCGTGCG GAAATGAGTT ATGCCATTTG CCACACGCTG GGCGTAAGAC CGGGTTTATA A
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Protein sequence | MSFFHANQRE ALNQSLAEVQ GQINVSFEFF PPRNSEMEQT LWNSIDRLSS LKPKFVSVTY GANSGERDRT HSVIKGIKER TGLEAAPHLT CIDATRDELR TIARDYWNNG IRHIVALRGD LPPGSGKPEM YAADLVGLLK EVADFDISVA AYPEVHPEAK SAQADLLNLK RKVDAGANRA ITQFFFDVES YLRFRDRCVS AGIDVEIIPG ILPVSNFKQA KKFADMTNVR IPSWMSLMFE GLDNDAETRK LVGANIAMDM VKILSREGVK DFHFYTLNRA EMSYAICHTL GVRPGL
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