Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4144 |
Symbol | |
ID | 6484766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4039008 |
End bp | 4039706 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642739400 |
Product | putative permease |
Protein accession | YP_002043109 |
Protein GI | 194445861 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.4015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATTTC AGCCATCCTT TGCGGGTCCA CAACCCGACT CAAGGATTGA TCGTACTACC TTTATTCGTC GCGCTTATCT TCATCTCGCC GTCGCCATCG TCGGTTTTAT CGTATTGAGC GCGGCGTGGA GTTTTATAGG GGTCGGGGAG TATGCGCTTG ATGTGCTGCT GGCTGGTGGA AGATATAGCT GGTTGGTTGT TCTCGGCGCT TTTATGCTGG TGGGAATGCT GGCGACCCGT CTGGCGGATA ATGCGGGAAA TAATCAAACG CAACTTATCG GGCTGGGGAT TTATGTGTTG GCAGAATCCC TGATTTTTGC CCCCCTGTTA ACGGTGGCGG CGTATATTAA CCCGTCGAGC ATTGGCGCGG CGGCAATAAC GACTCTGTTG CTGGTCGGCG GCCTGACGTT TACCGCTTTT TCTATAAAAA AAGACTTTTC TTTTCTGCGC TCGTTTCTGA CTATGGCTGG GTTCATTGCT TTTGGCGCGA TTATTGCCAG CGTCATCTGC GGCTTCTCGC TGGGTGTCTG GTTTTCTGCG CTAATGGTAC TGCTGTGCGC CGGGTTTATA CTTTACGATA CTTCTAATAT TATTCACCAT TACCCTACCG ATCGCCCTGC TGGCGCGGCA TTACATCTGT TCGCTTCTAT CGCGACCATG TTCTGGTATA TTTTGCGGAT TTTTATGTCG CGTAATTAA
|
Protein sequence | MSFQPSFAGP QPDSRIDRTT FIRRAYLHLA VAIVGFIVLS AAWSFIGVGE YALDVLLAGG RYSWLVVLGA FMLVGMLATR LADNAGNNQT QLIGLGIYVL AESLIFAPLL TVAAYINPSS IGAAAITTLL LVGGLTFTAF SIKKDFSFLR SFLTMAGFIA FGAIIASVIC GFSLGVWFSA LMVLLCAGFI LYDTSNIIHH YPTDRPAGAA LHLFASIATM FWYILRIFMS RN
|
| |