Gene SNSL254_A4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4144 
Symbol 
ID6484766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4039008 
End bp4039706 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content50% 
IMG OID642739400 
Productputative permease 
Protein accessionYP_002043109 
Protein GI194445861 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.4015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTC AGCCATCCTT TGCGGGTCCA CAACCCGACT CAAGGATTGA TCGTACTACC 
TTTATTCGTC GCGCTTATCT TCATCTCGCC GTCGCCATCG TCGGTTTTAT CGTATTGAGC
GCGGCGTGGA GTTTTATAGG GGTCGGGGAG TATGCGCTTG ATGTGCTGCT GGCTGGTGGA
AGATATAGCT GGTTGGTTGT TCTCGGCGCT TTTATGCTGG TGGGAATGCT GGCGACCCGT
CTGGCGGATA ATGCGGGAAA TAATCAAACG CAACTTATCG GGCTGGGGAT TTATGTGTTG
GCAGAATCCC TGATTTTTGC CCCCCTGTTA ACGGTGGCGG CGTATATTAA CCCGTCGAGC
ATTGGCGCGG CGGCAATAAC GACTCTGTTG CTGGTCGGCG GCCTGACGTT TACCGCTTTT
TCTATAAAAA AAGACTTTTC TTTTCTGCGC TCGTTTCTGA CTATGGCTGG GTTCATTGCT
TTTGGCGCGA TTATTGCCAG CGTCATCTGC GGCTTCTCGC TGGGTGTCTG GTTTTCTGCG
CTAATGGTAC TGCTGTGCGC CGGGTTTATA CTTTACGATA CTTCTAATAT TATTCACCAT
TACCCTACCG ATCGCCCTGC TGGCGCGGCA TTACATCTGT TCGCTTCTAT CGCGACCATG
TTCTGGTATA TTTTGCGGAT TTTTATGTCG CGTAATTAA
 
Protein sequence
MSFQPSFAGP QPDSRIDRTT FIRRAYLHLA VAIVGFIVLS AAWSFIGVGE YALDVLLAGG 
RYSWLVVLGA FMLVGMLATR LADNAGNNQT QLIGLGIYVL AESLIFAPLL TVAAYINPSS
IGAAAITTLL LVGGLTFTAF SIKKDFSFLR SFLTMAGFIA FGAIIASVIC GFSLGVWFSA
LMVLLCAGFI LYDTSNIIHH YPTDRPAGAA LHLFASIATM FWYILRIFMS RN