| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4140 |
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| Symbol | |
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| ID | 6482845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4032479 |
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| End bp | 4033297 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642739396 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002043105 |
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| Protein GI | 194442316 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0682871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGC GCATTAATAA AGACACTCAG GTCTGCATGT CCCTGGCGGC ACGCCCGAGT
AACTTCGGTA CACGCTTTCA CAACTATCTG TACGAAGCGC TGGATCTCAA TTATCTCTAC
AAAGCCTTTT CGCCGACCGA TCTTACGCAG GCCATTAGCG GCGTGCGCGG TCTGGGGATC
CGTGGGTGCG CGATCTCTAT GCCATTTAAG GAAGCCTGCA TTCCGCTGGT GGATGAACTG
GATGCTTCCG CTCAGGCCAT TCACTCAGTT AATACCATTG TGAATACCAA TGGCCATCTG
AAGGCGTACA ACACCGATTA CATTGCAATA GCTCGCTTGC TGGCGAATTA CAAGGTCTCT
CCCGACCTGG TGTTTGCTTT GCGTGGCAGC GGTGGTATGG CAAAGGCGGT GGCCTGCGCG
CTGAAGGATG CGGGGTTTAC CCGTGGTTAT ATTGTCGCGA TTGATGAAGC GTCAGGTAAA
CAACTGGCCG AACTCTATGG CTATGAATGG CGCCCGGATA CCGACGGTAT TGAAGCCGAT
TTGTTAATTA ACGCCACGCC TATCGGAATG GCTGGCGGTA ATGATGCCGA CAAACTCTCT
TATTCCGAAC AGGAAGTGGA TAAGGCGAGC GTTATCTTTG ATGTGGTGGC GCTACCGCCC
GTCACGCCGC TGATCCGCTA CGCCCGTGAA CGCGGTAAAA CCGTGATTAC CGGTTCCGAA
GTGTTTGCTA TTCAGGCCGT GGAGCAATTT GTCCTTTATA CCGGGATTCG CCCGGATGAC
GTGCTGTTTC AGAAAGCCGC GGCCTGGTCA CGTCTGTAA
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| Protein sequence | MTKRINKDTQ VCMSLAARPS NFGTRFHNYL YEALDLNYLY KAFSPTDLTQ AISGVRGLGI
RGCAISMPFK EACIPLVDEL DASAQAIHSV NTIVNTNGHL KAYNTDYIAI ARLLANYKVS
PDLVFALRGS GGMAKAVACA LKDAGFTRGY IVAIDEASGK QLAELYGYEW RPDTDGIEAD
LLINATPIGM AGGNDADKLS YSEQEVDKAS VIFDVVALPP VTPLIRYARE RGKTVITGSE
VFAIQAVEQF VLYTGIRPDD VLFQKAAAWS RL
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