Gene SNSL254_A4104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4104 
SymboltorD 
ID6483028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3990769 
End bp3991401 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content48% 
IMG OID642739360 
Productchaperone protein TorD 
Protein accessionYP_002043069 
Protein GI194446436 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGC AGCCAGCGCT TGCTCAGGAA CAGTACGCCT GCGTATATGC ATGGCTGGCG 
TTACTCTTTT TCCGGGAAGT GGATGATGAA GGGTTAATAC AATTACAGTC CGCGGAGATC
GCGGACTGGC TGGCGCTGTT AAAGCGTCAG CCCGCGCTGG CGGCGTCGGT GGCGTTACTC
GAACAAAAAA TTGCCGCACT TAGCCTGCGC CAGGATGCGC AGCTGGAGCT GGCCGCAGAT
TTTTGCGGAT TGTTCCTGAT GACGGATAAA AAATCGGCGT TGCCCTACGC CTCGCAATAC
CCGCAGCAGG AACCCGGCAT GATTAAACAT TTATTGCTTG AAGCCGGGAT GGAAGTCAAC
GACGATTTTA AAGAGCCGAC CGACCACCTG GCGATTTATC TGGAATTACT CAGCCATTTA
CATTTTTCAT TGGGTGAATC GTTCCAACAA CGGAGAATGA ATAAATTACG CCAGAAGACA
TTGTCGTCAT TACTGGAATG GCTTCCGGAA TTTACAAATA ATTGCCTTAA GCATGATCCC
TATGGCTTTT ATGCTGCGTT AAGTCAATTA TTGTTGGCTA TCGTTCGTTT TGATGACGGA
AAAGAGGATT TATCCATTGT TGCTGCTGAA TAA
 
Protein sequence
MIKQPALAQE QYACVYAWLA LLFFREVDDE GLIQLQSAEI ADWLALLKRQ PALAASVALL 
EQKIAALSLR QDAQLELAAD FCGLFLMTDK KSALPYASQY PQQEPGMIKH LLLEAGMEVN
DDFKEPTDHL AIYLELLSHL HFSLGESFQQ RRMNKLRQKT LSSLLEWLPE FTNNCLKHDP
YGFYAALSQL LLAIVRFDDG KEDLSIVAAE