Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4017 |
Symbol | |
ID | 6486407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3902560 |
End bp | 3903441 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642739276 |
Product | beta-lactamase |
Protein accession | YP_002042986 |
Protein GI | 194444541 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCT ATGCATTATT CTTTGTATGT ATATTTTCAA CATCAGCACT TCCTGCCATG GCGGCATTAG ATCCTTCACA ACCGTTATCA CCCGCGCCTC CGTTATCACT GTTTAAAGCG TGGGCTAAGC CTATAAAGCC GTTTCAAATC ACAGAAGGCG TGTGGTATGT CGGCACGGAA AATCTCTCTT CTATTCTGCT GACCACTCCG GCAGGGCATA TTCTTATTGA TGCGGGGTTG GATGAAAGCG CACCGCAAAT TAAAGCGAAT ATTGAAGCGG CAGGATTCCG CCTCACAGAC GTGCGCTATC TGTTGAATAG CCATGCGCGG CTGGATCAAG CGGGGGGCAT GGCACGTTTG AAAGCGTGGA GCGGCGCACA ATTGGTCGCC AGCCAACCCA ACGCCGATCA GATGGCGAGG GGTGGACGAC AGGATTTTGC GCTTGGCGAT GCGCTCCCCT TTCCGCCCGT CACCACCGAT AAAATTATCC ACAACCAGGA AAGCATCAGC CTCGGAGGGA TAACCGTGAC AGCGCTATTC ACGCCTGGAC ATCTACCCGG CTCAACCTCC TGGCGCGTAA CGCTCCGCAA CGGCAAGACG CTAATTTACG CTGACAGTCT CGCCACGCCC GACTATCTGC TGATTAACAA CAAAAATTAC CCTGACCTGG TTACTGATAT TCAGGGTAGC TTTAAGACGC TGGCCGCCCA GCATGTTGAT ATCTTTATTG CCAACAAAGG TGACCGCTTC GGGCTACTGG AGAAACGACA GCAACTTCGC AACGGCGATA CACAGGCATT CTTTGATTCC AATGGTTTGC AACAGTATGT GGAACGCTCG CGCCAGCGCT TCATCACACA ACTTACCGCA CAGCAGCCAT AA
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Protein sequence | MNRYALFFVC IFSTSALPAM AALDPSQPLS PAPPLSLFKA WAKPIKPFQI TEGVWYVGTE NLSSILLTTP AGHILIDAGL DESAPQIKAN IEAAGFRLTD VRYLLNSHAR LDQAGGMARL KAWSGAQLVA SQPNADQMAR GGRQDFALGD ALPFPPVTTD KIIHNQESIS LGGITVTALF TPGHLPGSTS WRVTLRNGKT LIYADSLATP DYLLINNKNY PDLVTDIQGS FKTLAAQHVD IFIANKGDRF GLLEKRQQLR NGDTQAFFDS NGLQQYVERS RQRFITQLTA QQP
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