Gene SNSL254_A4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4017 
Symbol 
ID6486407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3902560 
End bp3903441 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content52% 
IMG OID642739276 
Productbeta-lactamase 
Protein accessionYP_002042986 
Protein GI194444541 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCT ATGCATTATT CTTTGTATGT ATATTTTCAA CATCAGCACT TCCTGCCATG 
GCGGCATTAG ATCCTTCACA ACCGTTATCA CCCGCGCCTC CGTTATCACT GTTTAAAGCG
TGGGCTAAGC CTATAAAGCC GTTTCAAATC ACAGAAGGCG TGTGGTATGT CGGCACGGAA
AATCTCTCTT CTATTCTGCT GACCACTCCG GCAGGGCATA TTCTTATTGA TGCGGGGTTG
GATGAAAGCG CACCGCAAAT TAAAGCGAAT ATTGAAGCGG CAGGATTCCG CCTCACAGAC
GTGCGCTATC TGTTGAATAG CCATGCGCGG CTGGATCAAG CGGGGGGCAT GGCACGTTTG
AAAGCGTGGA GCGGCGCACA ATTGGTCGCC AGCCAACCCA ACGCCGATCA GATGGCGAGG
GGTGGACGAC AGGATTTTGC GCTTGGCGAT GCGCTCCCCT TTCCGCCCGT CACCACCGAT
AAAATTATCC ACAACCAGGA AAGCATCAGC CTCGGAGGGA TAACCGTGAC AGCGCTATTC
ACGCCTGGAC ATCTACCCGG CTCAACCTCC TGGCGCGTAA CGCTCCGCAA CGGCAAGACG
CTAATTTACG CTGACAGTCT CGCCACGCCC GACTATCTGC TGATTAACAA CAAAAATTAC
CCTGACCTGG TTACTGATAT TCAGGGTAGC TTTAAGACGC TGGCCGCCCA GCATGTTGAT
ATCTTTATTG CCAACAAAGG TGACCGCTTC GGGCTACTGG AGAAACGACA GCAACTTCGC
AACGGCGATA CACAGGCATT CTTTGATTCC AATGGTTTGC AACAGTATGT GGAACGCTCG
CGCCAGCGCT TCATCACACA ACTTACCGCA CAGCAGCCAT AA
 
Protein sequence
MNRYALFFVC IFSTSALPAM AALDPSQPLS PAPPLSLFKA WAKPIKPFQI TEGVWYVGTE 
NLSSILLTTP AGHILIDAGL DESAPQIKAN IEAAGFRLTD VRYLLNSHAR LDQAGGMARL
KAWSGAQLVA SQPNADQMAR GGRQDFALGD ALPFPPVTTD KIIHNQESIS LGGITVTALF
TPGHLPGSTS WRVTLRNGKT LIYADSLATP DYLLINNKNY PDLVTDIQGS FKTLAAQHVD
IFIANKGDRF GLLEKRQQLR NGDTQAFFDS NGLQQYVERS RQRFITQLTA QQP