Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3841 |
Symbol | rsmD |
ID | 6482830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3714875 |
End bp | 3715498 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739106 |
Product | 16S rRNA m(2)G966-methyltransferase |
Protein accession | YP_002042817 |
Protein GI | 194445335 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAACAGG CGGTTCGAGC AAGAGAAATG AAAAAACCGA CTCACTCTGG CAGCGGCCAA ATCCGCATTA TTGGCGGGCA ATGGCGTGGC CGTAAATTAC CGGTTCCGGA CAGCCCGGGT CTGCGTCCCA CCACCGATCG CGTGCGCGAA ACGTTATTTA ACTGGCTGGC TCCGGTAATG GTAGACGCCC ATTGTCTGGA TTGCTTTGCC GGCAGCGGCG CGCTGGGTCT GGAAGCGCTA TCGCGTTATG CGGCCCAGGC AACGTTACTG GAAATGGATC GCGCCGTATC GCAGCAGTTG CAAAAAAATC TGGCGACGCT GAAAGCCAAC AATGCTCGCG TCGTCAATAC CAATACTCTG GCCTTCCTCA GCCAGCCGGG GACGCCGCAT CACGTCGTCT TTGTCGACCC GCCGTTTCGT AAAGGGCTGC TGGAAGAGAC GTTACAATTG CTGGAAACCC AGGGATGGCT GGCCGACGAC GCGCTAATCT ACGTAGAAAG CGAGGTGGAA AACGGTCTGC CGCCCGTTCC GGCGAACTGG GCATTGTATC GAGAAAAGGT GGCCGGACAG GTTGCTTATC GTCTGTATCA GCGCGACGCG CAAGGAGAAA ATGATGTTGA TTAA
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Protein sequence | MQQAVRAREM KKPTHSGSGQ IRIIGGQWRG RKLPVPDSPG LRPTTDRVRE TLFNWLAPVM VDAHCLDCFA GSGALGLEAL SRYAAQATLL EMDRAVSQQL QKNLATLKAN NARVVNTNTL AFLSQPGTPH HVVFVDPPFR KGLLEETLQL LETQGWLADD ALIYVESEVE NGLPPVPANW ALYREKVAGQ VAYRLYQRDA QGENDVD
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