Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3413 |
Symbol | exbB |
ID | 6483952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3309339 |
End bp | 3310073 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738704 |
Product | biopolymer transport protein ExbB |
Protein accession | YP_002042424 |
Protein GI | 194444554 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTAATA ATTTGATGCA GACGGATCTT TCCGTCTGGG GCATGTATCA GCACGCCGAT ATTGTCGTGA AGTGCGTGAT GATTGGTTTG ATTCTGGCGT CAGTCGTCAC CTGGGCTATC TTCTTCAGTA AAAGCGTTGA ATTTTTCACG CAAAAGCGCC GCTTAAAGCG CGAACAATTG CAATTAGCCG ATGCGCGCTC CTTAGATCAG GCTTCCGACA TTGCGGCAGG TTTCAGCGCA AAAAGCCTCA GCGCACAACT CATCAATGAA GCGCAGAATG AACTGGAACT CTCTCAGGGC AGCGAAGATA ACGAAGGGAT TAAAGAACGT ACCGGCTTCC GTCTGGAACG TCGCGTCGCG GCAGTTGGCC GCTACATGGG ACGAGGCAAC GGTTATCTGG CGACGATCGG CGCCATTTCC CCCTTCGTCG GGTTGTTTGG CACCGTATGG GGCATTATGA ATAGCTTCAT CGGTATTGCG CAAACGCAGA CCACCAACCT GGCGGTGGTT GCTCCTGGTA TTGCGGAAGC GCTGCTGGCG ACGGCGATTG GGCTGGTAGC CGCGATCCCG GCGGTCGTCA TTTACAACAT CTTCGCACGT CAGATAGGCA GTTACAAAGC GACGCTGGGC GACGTGGCGG CGCAGGTATT GCTGCTGCAA AGCCGCGATC TTGATCTGAA TGCGAGCGCC AGTGCGCAGC CGGTACGCTC CGCGCAGAAA TTACGGGTAG GGTAA
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Protein sequence | MGNNLMQTDL SVWGMYQHAD IVVKCVMIGL ILASVVTWAI FFSKSVEFFT QKRRLKREQL QLADARSLDQ ASDIAAGFSA KSLSAQLINE AQNELELSQG SEDNEGIKER TGFRLERRVA AVGRYMGRGN GYLATIGAIS PFVGLFGTVW GIMNSFIGIA QTQTTNLAVV APGIAEALLA TAIGLVAAIP AVVIYNIFAR QIGSYKATLG DVAAQVLLLQ SRDLDLNASA SAQPVRSAQK LRVG
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