Gene SNSL254_A3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3413 
SymbolexbB 
ID6483952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3309339 
End bp3310073 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID642738704 
Productbiopolymer transport protein ExbB 
Protein accessionYP_002042424 
Protein GI194444554 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAATA ATTTGATGCA GACGGATCTT TCCGTCTGGG GCATGTATCA GCACGCCGAT 
ATTGTCGTGA AGTGCGTGAT GATTGGTTTG ATTCTGGCGT CAGTCGTCAC CTGGGCTATC
TTCTTCAGTA AAAGCGTTGA ATTTTTCACG CAAAAGCGCC GCTTAAAGCG CGAACAATTG
CAATTAGCCG ATGCGCGCTC CTTAGATCAG GCTTCCGACA TTGCGGCAGG TTTCAGCGCA
AAAAGCCTCA GCGCACAACT CATCAATGAA GCGCAGAATG AACTGGAACT CTCTCAGGGC
AGCGAAGATA ACGAAGGGAT TAAAGAACGT ACCGGCTTCC GTCTGGAACG TCGCGTCGCG
GCAGTTGGCC GCTACATGGG ACGAGGCAAC GGTTATCTGG CGACGATCGG CGCCATTTCC
CCCTTCGTCG GGTTGTTTGG CACCGTATGG GGCATTATGA ATAGCTTCAT CGGTATTGCG
CAAACGCAGA CCACCAACCT GGCGGTGGTT GCTCCTGGTA TTGCGGAAGC GCTGCTGGCG
ACGGCGATTG GGCTGGTAGC CGCGATCCCG GCGGTCGTCA TTTACAACAT CTTCGCACGT
CAGATAGGCA GTTACAAAGC GACGCTGGGC GACGTGGCGG CGCAGGTATT GCTGCTGCAA
AGCCGCGATC TTGATCTGAA TGCGAGCGCC AGTGCGCAGC CGGTACGCTC CGCGCAGAAA
TTACGGGTAG GGTAA
 
Protein sequence
MGNNLMQTDL SVWGMYQHAD IVVKCVMIGL ILASVVTWAI FFSKSVEFFT QKRRLKREQL 
QLADARSLDQ ASDIAAGFSA KSLSAQLINE AQNELELSQG SEDNEGIKER TGFRLERRVA
AVGRYMGRGN GYLATIGAIS PFVGLFGTVW GIMNSFIGIA QTQTTNLAVV APGIAEALLA
TAIGLVAAIP AVVIYNIFAR QIGSYKATLG DVAAQVLLLQ SRDLDLNASA SAQPVRSAQK
LRVG