Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3395 |
Symbol | |
ID | 6486683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3295405 |
End bp | 3296457 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642738686 |
Product | periplasmic binding protein |
Protein accession | YP_002042406 |
Protein GI | 194442766 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.182926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAT TTTTGCGCCA GCTCTCTCTG CTGGCGTTGC TTTTTTGCTG GCCGTTAATG TCACAGGCGG CGCGTACTTT TACCGATCAA ATTGGCCGCC AGGTCACGGT TCCGGACACC GTCGACAGAG TGGTGGTGCT CCAGCATCAA ACGCTCAATC TCCTTGTACA GATGAATGCC ACTGACAAAA TCGTTGGGGT CATGGCGAAC TGGAAACAGC AATTAGGCGA CGGCTATGCG CGTCTGGCGC CGGAACTGGC GCAAAAAGCC TCGCTGGGCG ATCTAACGCA CGTTGATCTT GAAAAACTGG TGGCGCTGCA CCCGCAGGTG GTGTTTGTCA CGAATTACGC TCCGCAGGAG ATGATCGACA AGATCAGCCG TCTTGGCATT CCGGTGGTGG CGATTTCGCT GCGCCATGAT ATTGCTGGCG AGCAGGCTAA AATGAACCCG ACCCTGGCCG ATGAAGAGCA GGCTTATAAT CGCGAGCTGC GTGAAGGAAT AACGCTGATT GGCGATATCG TCAATAAACC GCAGGAGGCG AAAGCGCTGA TTGAGGCGAT GGATAAAGGT CGCAAGATGG TCAGCGACCG TTTGCAGTCG GTTCCTGAAA ATGAGCGAGT TCGCGCCTAT ATGGCGAATC CGGAGTTGAC CACCTACGGT TCCGGTAAAT ATACCGGTCT GATGATGGCC CATGCGGGGG CGCTGAATGT AGCGGCATCC TCGGTGAAAG GCTTTAAGCA GGTGACAATG GAGCAGGTGA TCGCCTGGGA TCCGCAGGTG ATCTTTGTCC AGAATCGCTA TCCAAAGGTC GTCAATGAGA TCCTGCACAA TCCCCAGTGG CAGGTCATTG ACGCGGTGAA GCATCATCGG GTTTACCTGA TGCCGGATTA TGCCAAAGCC TGGGGATATC CGATGCCGGA GGCGGTGGGA ATCGGCGAAC TGTGGATGGC GAAAAAACTC TATCCGCAAA AATTCCACGA TATTGACATG CAAAAGGCCG CTAACGACTG GTATCAACGT TTTTACCGTA CTGACTATCA GGGCGTACAG TGA
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Protein sequence | MNKFLRQLSL LALLFCWPLM SQAARTFTDQ IGRQVTVPDT VDRVVVLQHQ TLNLLVQMNA TDKIVGVMAN WKQQLGDGYA RLAPELAQKA SLGDLTHVDL EKLVALHPQV VFVTNYAPQE MIDKISRLGI PVVAISLRHD IAGEQAKMNP TLADEEQAYN RELREGITLI GDIVNKPQEA KALIEAMDKG RKMVSDRLQS VPENERVRAY MANPELTTYG SGKYTGLMMA HAGALNVAAS SVKGFKQVTM EQVIAWDPQV IFVQNRYPKV VNEILHNPQW QVIDAVKHHR VYLMPDYAKA WGYPMPEAVG IGELWMAKKL YPQKFHDIDM QKAANDWYQR FYRTDYQGVQ
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