Gene SNSL254_A3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3369 
Symbol 
ID6485734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3268060 
End bp3268902 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID642738660 
ProductHpcH/HpaI aldolase/citrate lyase family protein 
Protein accessionYP_002042380 
Protein GI194446251 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.988595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.440795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA TTTCTCATAC ACCGACACGT AGCTGGCTTT TTACCCCAGC AATTCGACCA 
GAACGTTTCA TAAAAGCAGT TGAAAGTGCG GCGGATATTT CTATTATCGA TCTTGAAGAT
TCCGTCACCC CGAATGACAA GGCGCAGGCC CGGAAAATTG CGATGCAGTT CCTTTCATCC
CGACCAAACT CATCGCTGAA AATAGCATTA AGAATTAATG GAATGAATAC TCATGCTGGC
ATTGAAGACC TGCATATGTT ACTGGAATGC CGTTTTTTTC CTGATTACAT TATTCTTCCA
AAAACAGAGT CAGCCGCGCA CCTGCAAATC GTGGATAGTC TTATCATGAT GGCTGGTTCT
GATACTCGCC TTATTGGCAT TATTGAGTCA GTTGTTGGGC TTAATGCCGT AGAGTCTATT
GCGGACGCCA CCCCCAGACT CTGCGGGTTG ATGTTTGGCG CCGCAGATAT GGCGGCTGAC
ATTGGCGCCA CACCCGCCTG GGAGCCTCTT GCGCTGGCGC GGGCCAGAAT AGTGGCTGCC
TGCGCTATGA AAGGGCTTCT TGCAATAGAT GCTCCCTTCT TTGATATAGG CGATTTTTCA
GGTCTGAAAG AGGAAACGCT GCAGGCGCTC AGTTTTGGTT TTTCTGCAAA ATCGGCTATT
CACCCCGCTC AGATTAGTGT AATCAACGCC GCATTTACTC CTACAACGGC AGAAATTAAT
CATGCTCGTG CAGTACTGAC AGAGAATGCC AAAGGCGTCG GGATCGTTAG CGGCATGATG
ATAGATGCAG CCGTTGCCCG TCAGGCCCGG AGATTACTCG CCCGGGCAGG GATCTTTTCC
TGA
 
Protein sequence
MPDISHTPTR SWLFTPAIRP ERFIKAVESA ADISIIDLED SVTPNDKAQA RKIAMQFLSS 
RPNSSLKIAL RINGMNTHAG IEDLHMLLEC RFFPDYIILP KTESAAHLQI VDSLIMMAGS
DTRLIGIIES VVGLNAVESI ADATPRLCGL MFGAADMAAD IGATPAWEPL ALARARIVAA
CAMKGLLAID APFFDIGDFS GLKEETLQAL SFGFSAKSAI HPAQISVINA AFTPTTAEIN
HARAVLTENA KGVGIVSGMM IDAAVARQAR RLLARAGIFS