Gene SNSL254_A3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3256 
Symbol 
ID6484521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3168515 
End bp3169339 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content53% 
IMG OID642738554 
Productnickel/cobalt efflux protein RcnA 
Protein accessionYP_002042276 
Protein GI194446527 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0374034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAAT TTTCGACACT TCTTCAGCAA GGAAACGGCT GGTTCTTCAT TCCCAGCGCC 
ATTTTATTAG GTATTTTGCA CGGGCTTGAA CCAGGGCACT CCAAAACCAT GATGGCGGCT
TTTATCATTG CCATTAAAGG TACGGTTAAA CAGGCCGTCA TGCTCGGTCT GGCAGCAACG
CTTTCTCATA CCGCGATCGT CTGGTTAATC GCGCTGGGTG GGATGTATCT TAGCCGGGCA
TTCACCGCAC AATCAGTGGA ACCATGGCTG CAGTTAATTT CTGCGATTAT TATTCTGAGC
ACCGCGTGCT GGATGTTCTG GCGGACATGG CGAGGCGAGC AGCAGTGGCT GGCGGGAAAC
CACCATCACG ACCACGACCA CGACCACGAC CACGACCACG ACCATCATGG TCACATACAT
CCGGAAGGTG CAACGTCAAA AGCGTATCAG GATGCCCATG AACGCGCCCA TGCTGCCGAT
ATTCAACGCC GTTTTGATGG TCAAACAGTG ACTAATGGAC AGATCCTGCT GTTCGGCCTG
ACCGGAGGGC TTATCCCCTG TCCGGCTGCG ATCACCGTTT TACTGATTTG TATCCAGCTT
AAAGCGTTTA CACTGGGCGC CACGATGGTG CTGAGCTTTA GTCTTGGCCT GGCATTAACG
CTGGTGACGG TAGGCGTTGG CGCGGCGATA AGCGTTCAAC AGGCAGCAAA GCGCTGGAGT
GGTTTTTCGA CGCTTGCCCG GCGGGCGCCC TATTTTTCGA GCATTCTGAT TGGTCTGGTC
GGCGTGTATA TGGGAATTCA TGGCTATACC GGGATCATGC AGTAA
 
Protein sequence
MGEFSTLLQQ GNGWFFIPSA ILLGILHGLE PGHSKTMMAA FIIAIKGTVK QAVMLGLAAT 
LSHTAIVWLI ALGGMYLSRA FTAQSVEPWL QLISAIIILS TACWMFWRTW RGEQQWLAGN
HHHDHDHDHD HDHDHHGHIH PEGATSKAYQ DAHERAHAAD IQRRFDGQTV TNGQILLFGL
TGGLIPCPAA ITVLLICIQL KAFTLGATMV LSFSLGLALT LVTVGVGAAI SVQQAAKRWS
GFSTLARRAP YFSSILIGLV GVYMGIHGYT GIMQ