Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3256 |
Symbol | |
ID | 6484521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3168515 |
End bp | 3169339 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642738554 |
Product | nickel/cobalt efflux protein RcnA |
Protein accession | YP_002042276 |
Protein GI | 194446527 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0374034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGAAT TTTCGACACT TCTTCAGCAA GGAAACGGCT GGTTCTTCAT TCCCAGCGCC ATTTTATTAG GTATTTTGCA CGGGCTTGAA CCAGGGCACT CCAAAACCAT GATGGCGGCT TTTATCATTG CCATTAAAGG TACGGTTAAA CAGGCCGTCA TGCTCGGTCT GGCAGCAACG CTTTCTCATA CCGCGATCGT CTGGTTAATC GCGCTGGGTG GGATGTATCT TAGCCGGGCA TTCACCGCAC AATCAGTGGA ACCATGGCTG CAGTTAATTT CTGCGATTAT TATTCTGAGC ACCGCGTGCT GGATGTTCTG GCGGACATGG CGAGGCGAGC AGCAGTGGCT GGCGGGAAAC CACCATCACG ACCACGACCA CGACCACGAC CACGACCACG ACCATCATGG TCACATACAT CCGGAAGGTG CAACGTCAAA AGCGTATCAG GATGCCCATG AACGCGCCCA TGCTGCCGAT ATTCAACGCC GTTTTGATGG TCAAACAGTG ACTAATGGAC AGATCCTGCT GTTCGGCCTG ACCGGAGGGC TTATCCCCTG TCCGGCTGCG ATCACCGTTT TACTGATTTG TATCCAGCTT AAAGCGTTTA CACTGGGCGC CACGATGGTG CTGAGCTTTA GTCTTGGCCT GGCATTAACG CTGGTGACGG TAGGCGTTGG CGCGGCGATA AGCGTTCAAC AGGCAGCAAA GCGCTGGAGT GGTTTTTCGA CGCTTGCCCG GCGGGCGCCC TATTTTTCGA GCATTCTGAT TGGTCTGGTC GGCGTGTATA TGGGAATTCA TGGCTATACC GGGATCATGC AGTAA
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Protein sequence | MGEFSTLLQQ GNGWFFIPSA ILLGILHGLE PGHSKTMMAA FIIAIKGTVK QAVMLGLAAT LSHTAIVWLI ALGGMYLSRA FTAQSVEPWL QLISAIIILS TACWMFWRTW RGEQQWLAGN HHHDHDHDHD HDHDHHGHIH PEGATSKAYQ DAHERAHAAD IQRRFDGQTV TNGQILLFGL TGGLIPCPAA ITVLLICIQL KAFTLGATMV LSFSLGLALT LVTVGVGAAI SVQQAAKRWS GFSTLARRAP YFSSILIGLV GVYMGIHGYT GIMQ
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