| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3173 |
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| Symbol | |
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| ID | 6485634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3083466 |
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| End bp | 3084239 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738478 |
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| Product | chaperone protein PapD |
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| Protein accession | YP_002042202 |
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| Protein GI | 194443504 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.315924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA CCAACCATTT TAAGCGCCAG GCGCTTATCG CTTCGGTATT ACTGGCTGCG
CCGCTGGTAT CGCACAGCGC GATTGTGCCG GATCGTACCC GCGTTATTTT TAACGGCAAT
GAAAATTCAA TCACCGTCAC GCTGAAAAAC GGCAACGCCA CTCTGCCCTA CCTCGCACAG
GCGTGGCTGG AAGACGATAA GTTCGCCAAA GATACCCGCT ATTTTACCGC CCTGCCGCCG
CTGCAGCGTA TTGAGCCAAA ATCCGACGGG CAGGTTAAAG TCCAGCCGTT ACCAGCCGCG
GCTAGCCTAC CGCAGGACCG GGAAAGTCTG TTTTATTTCA ACGTGCGGGA AATTCCGCCG
AAAAGCGATA AGCCTAATAC GCTCCAGCTG GCGCTGCAAA CGCGTATTAA GTTTTTCTAC
CGCCCGGTAG CCGTCGCCCG GCAGGTGGAT AAGACGCACC CGTGGCAGAC GAAGCTCACG
CTGACCTACC AGGGCGATGG TGTGATCTTC GACAACCCCA CACCGTTTTA CCTCGTCATC
AGCAATGCCG GTAGCAAAGA GAACGAAACC GCCTCCGGCT TTAAAAACCT GCTGATTGCC
CCGCGTGAAA AAGTGACCTC TCCCATCAAA GGTGCCTCGC TCGGCAGCTC GCCGGTGGTG
GGCTACGTCG ATGATTACGG CGGCCATCGC CTGCTGGTTT TTACCTGCTC AGGGAATACC
TGCAAGGTCA ATGAGGAAAA AACCCGTGAC GCTGAGAAGA AAGCGAATAA GTAA
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| Protein sequence | MNKTNHFKRQ ALIASVLLAA PLVSHSAIVP DRTRVIFNGN ENSITVTLKN GNATLPYLAQ
AWLEDDKFAK DTRYFTALPP LQRIEPKSDG QVKVQPLPAA ASLPQDRESL FYFNVREIPP
KSDKPNTLQL ALQTRIKFFY RPVAVARQVD KTHPWQTKLT LTYQGDGVIF DNPTPFYLVI
SNAGSKENET ASGFKNLLIA PREKVTSPIK GASLGSSPVV GYVDDYGGHR LLVFTCSGNT
CKVNEEKTRD AEKKANK
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