| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3171 |
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| Symbol | |
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| ID | 6486691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3080087 |
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| End bp | 3080674 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642738476 |
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| Product | putative fimbrial subunit |
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| Protein accession | YP_002042200 |
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| Protein GI | 194444776 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.320855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.326781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAT CTCATTTTTG TAAACTGGCA GTAACTGCAT CTTTAGTTAT GGGAATTGTC
TCCGGCGCTC AAGCCGCGGG TAGCAACACA GCGAAGGTCA CTTTCCTTGG TAATATTGTT
GACTCCCCCT GCTCCGTCAC ATTGGATACG GAAGATCAAA CAGTCAATAT GGGTTCAAGT
ATCGGTAATG GCACGCTGAG TAATGGTAAA ACGACCATCA ACAATGCCCG TACCTTTCAT
ATCGATCTTG AGGGTTGTAC CTGGGCTACC GAGAAAAATA TGAATGTGGT ATTCACTACA
GGTAGTGGAA CCACAGCGGC TACAGGCGCC ACGGATAATC TCGCGCTGAT GAAGACTGAC
GGCACCGGCG CTATTAGCAA TGTAAGCCTG GCAATCGGCG ATGCTGGCAA AAACAATATC
AAACTGGGTG ATACCTATAC ACAGGCCATT GCGGACCTGG ACGGAGATAC CATTCTTGAT
GAGAAGCAAA GCCTGAATTT CACCGCCTGG CTGGTTGGCG CAGCAACCGG CACCGTAGGC
ACAGGTGAAT TCAGCAGCGC CGCCAACGTC ACTATCTCTT ACCTGTAA
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| Protein sequence | MKSSHFCKLA VTASLVMGIV SGAQAAGSNT AKVTFLGNIV DSPCSVTLDT EDQTVNMGSS
IGNGTLSNGK TTINNARTFH IDLEGCTWAT EKNMNVVFTT GSGTTAATGA TDNLALMKTD
GTGAISNVSL AIGDAGKNNI KLGDTYTQAI ADLDGDTILD EKQSLNFTAW LVGAATGTVG
TGEFSSAANV TISYL
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