Gene SNSL254_A3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3162 
Symbol 
ID6485982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3072247 
End bp3073044 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content52% 
IMG OID642738468 
Productbeta-lactamase domain protein 
Protein accessionYP_002042192 
Protein GI194442488 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.20789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.546421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAA GGATCAGGGT ATTGCTCGAA AATCATAAGG GAGCTGGAGC GGATAAATCG 
TTGAAGGCCC GGCCAGGGTT AAGCCTGTTG GTCGAGGATG AGTCTACGTC TATCTTGTTC
GATACCGGCC CTGATGGCAG TTTTATGCAA AACGCGTTGG CGATGGGGAT CGACCTGTCC
GATGTGTCTG CTGTGGTGCT TTCGCATGGT CATTACGATC ATTGCGGCGG CGTGCCGTGG
CTTCCTGATA ACAGTCGAAT CATCTGCCAT CCCGATATTG CGCGCGAACG TTATGCGGCA
ATGACTTTTC TCGGTATTAC CCGAAAAATA AAAAAATTGT CGTGTGAGGT GGACTATTCA
CGCTACCGAA TGATGTACAC GCGTGGCCCC CTGCCGATTG GCGAAAACTT TATCTGGTCA
GGGGAAATAC CGGTGGTCGC GCCTGAAGCC TACGGTATTT TTGGCGGCCA CGATGCGGAG
CCGGACTCTA TTTTGGATGA GGGCGTACTG ATTTACCAAT CGACAAAAGG ATTAGTCATC
ATTACGGGAT GCGGGCATCG GGGGATCGCA AATATTGTCC GGCACTGTCA GAACATTACC
GGTATAAAGC GGATTTACGC GCTTGTCGGC GGATTTCATC TCCGCTGCGC ATCACCGTTC
ACGCTGTGGC GAGTCAGGCG CTTTCTGCAA GAACAAAAAC CTGAAAAACT ATGCGGTTGT
CACTGTACAG GGGCCTGGGG GCGGTTGTGG CTACCGGAAA TAACCGCACC TGCAACCGGT
GATGTGCTGC GCTTTTAA
 
Protein sequence
MALRIRVLLE NHKGAGADKS LKARPGLSLL VEDESTSILF DTGPDGSFMQ NALAMGIDLS 
DVSAVVLSHG HYDHCGGVPW LPDNSRIICH PDIARERYAA MTFLGITRKI KKLSCEVDYS
RYRMMYTRGP LPIGENFIWS GEIPVVAPEA YGIFGGHDAE PDSILDEGVL IYQSTKGLVI
ITGCGHRGIA NIVRHCQNIT GIKRIYALVG GFHLRCASPF TLWRVRRFLQ EQKPEKLCGC
HCTGAWGRLW LPEITAPATG DVLRF