Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3127 |
Symbol | kpdC |
ID | 6484984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3042023 |
End bp | 3043450 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738439 |
Product | 4-hydroxybenzoate decarboxylase subunit C |
Protein accession | YP_002042163 |
Protein GI | 194446627 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.147886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTG ATGATTTGCG CAGTTTTTTA CATGCGCTGG ATCAGCAGGG ACAACTGCTG AAAATCAGCG AGGAAGTGAA TGCGGAGCCG GATCTCGCAG CCGCTGCCAA CGCAACGGGA CGCATCGGCG ATGGCGCGCC CGCGCTGTGG TTTGACAATA TTCGTGGTTT TACCGACGCC CGCGTGGCGA TGAATACCAT CGGTTCCTGG CAGAACCATG CCATCTCACT GGGTTTGCCG CCTAACACGC CGGTTAAAAA ACAGATCGAT GAATTTATTC GCCGCTGGGA CAATTTTCCG GTAGCGCCGG AACGGCGGGC GAATCCGGGC TGGGTGGAAA ATACCGTCGA CGGCGACGCG ATCAACCTGT TTGATATCCT GCCGCTGTTT CGTCTGAACG ACGGCGACGG CGGATTCTAT CTGGATAAAG CCTGTGTGGT ATCACGCGAT CCGCTCGATC CCGATAACTT CGGCAAGCAG AATGTCGGCA TCTACCGCAT GGAAGTTAAA GGCAAGCGTA AGCTGGGTCT GCAACCAGTG CCGATGCATG ATATCGCATT GCACCTGCAC AAAGCTGAAG AGCGCGGGGA AGATCTGCCG ATTGCGATCA CGTTGGGTAA CGATCCGATC ATTACCCTGA TGGGCGCAAC GCCGCTGAAA TACGATCAGT CAGAGTATGA AATGGCAGGC GCGCTGCGTG AAAGCCCCTA TCCTATCGCC ACCGCGCCGC TGACCGGTTT TGATGTGCCG TGGGGATCTG AAGTCATTCT TGAAGGGGTC ATCGAAAGCC GTAAACGTGA AATTGAAGGA CCGTTCGGCG AATTTACCGG CCACTATTCC GGCGGTCGCA ACATGACCGT GGTGCGTATC GATAAGATCT CTTACCGCAG CAAACCCATT TTTGAATCGC TCTATTTAGG TATGCCGTGG ACAGAAATCG ACTACCTGAT GGGGCCGGCG ACCTGCGTGC CACTGTATCA ACAGCTGAAA ACCGAATTTC CGGAAGTGCA GGCGGTAAAC GCCATGTACA CCCACGGCTT GCTGGCCATC ATCTCGACCA AAAAACGCTA CGGCGGCTTT GCCCGTGCGG TGGGCCTGCG AGCGATGACG ACGCCGCACG GTCTGGGATA TGTGAAGATG GTGATCATGG TCGATGAAGA TGTCGATCCA TTCAATCTGC CACAGGTGAT GTGGGCGTTG TCGTCGAAAG TGAATCCGGC AGGCGATCTG GTACAGCTAC CGAATATGTC CGTCCTGGAA CTGGACCCGG GCTCAAGCCC GGCGGGGATT ACCGACAAGC TGATCATTGA CGCCACCACG CCGGTTGCGC CAGATAACCG TGGTCACTAT AGCCAGCCGG TTGTTGATTT ACCGGAAACT AAAGCCTGGG CTGAAAAGCT GACCGCCATG CTGGCCAACC GTAAATAA
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Protein sequence | MAFDDLRSFL HALDQQGQLL KISEEVNAEP DLAAAANATG RIGDGAPALW FDNIRGFTDA RVAMNTIGSW QNHAISLGLP PNTPVKKQID EFIRRWDNFP VAPERRANPG WVENTVDGDA INLFDILPLF RLNDGDGGFY LDKACVVSRD PLDPDNFGKQ NVGIYRMEVK GKRKLGLQPV PMHDIALHLH KAEERGEDLP IAITLGNDPI ITLMGATPLK YDQSEYEMAG ALRESPYPIA TAPLTGFDVP WGSEVILEGV IESRKREIEG PFGEFTGHYS GGRNMTVVRI DKISYRSKPI FESLYLGMPW TEIDYLMGPA TCVPLYQQLK TEFPEVQAVN AMYTHGLLAI ISTKKRYGGF ARAVGLRAMT TPHGLGYVKM VIMVDEDVDP FNLPQVMWAL SSKVNPAGDL VQLPNMSVLE LDPGSSPAGI TDKLIIDATT PVAPDNRGHY SQPVVDLPET KAWAEKLTAM LANRK
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