Gene SNSL254_A3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3109 
Symbol 
ID6486789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3024723 
End bp3025160 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content56% 
IMG OID642738421 
Productputative transposase 
Protein accessionYP_002042145 
Protein GI194443000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0000406052 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAAAGGC ATACTTTCCC GCTCAGAGGC TCGACAGATG CGCAGGCACT GCCGGGGCTG 
ATTAGCCAGA CTCACCGTAA AATCAGGGAA GCCTCGGCTG ACGGCGCTTA TGACACGCGC 
TATTGCCATG ATGTGTTATT AATCAGGCCG CTAATCCCGC CACGAAGCGG TGCGCGATAC 
TGGCCGGGCA AGTACCATGA GCGTAACCAC GCGGTGGCGA ATCAACATCT GAGCGGCAGC 
AATGAGGTCT GGAAAAAGAA AGTGGGCTAT CACCGTCGTT CAGTAGCGGA AACGGTCATG 
TTCCGTATCA AAACCTTGCT GGGCGGCCAT TTGAGCCTGC GGAACTATGA CGCGCAGGTG 
GGTGAAGTGA TGGCGATGGT CAAAGCGCTG AACCGGATGA CGTTGTTGGC AATGCCGACC 
AGCGTCAGGC TCGTATAA
 
Protein sequence
MQRHTFPLRG STDAQALPGL ISQTHRKIRE ASADGAYDTR YCHDVLLIRP LIPPRSGARY 
WPGKYHERNH AVANQHLSGS NEVWKKKVGY HRRSVAETVM FRIKTLLGGH LSLRNYDAQV 
GEVMAMVKAL NRMTLLAMPT SVRLV