Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2984 |
Symbol | |
ID | 6486164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2912664 |
End bp | 2914178 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642738300 |
Product | integral membrane protein |
Protein accession | YP_002042029 |
Protein GI | 194442858 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.533441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCT GGATATATCT TTCTCAGGGC TTTGCGGTGG CGATGACGCC GGAAAACCTG GTTATCGCGT TGATTGGCTG CTTCGTGGGC ACGATTGTCG GTCTGCTGCC GGGCCTGGGA CCGATCAACG GCGTGGCAAT CTTACTGCCG CTGGCCTTTG CGTTGCATCT GCCTGCGGAG TCGGCGCTAA TTCTGCTGGC GACGGTGTAC ATTGGGTGTG AGTATGGCGG CAGGATCTCC TCCATATTGC TCAATGTCCC CGGCGATGCG GCGGCGATCA TGACGGCGCT GGACGGTTAC CCGATGGCGC AGCAAGGGAA AGGCGGCGTA GCGCTGTCGA TTTCCGCAGT CAGCTCATTT TTCGGTTCAT TAATCGCTAT CGGCGGCATC ATTCTATTCG CCCCTTTACT GGCGCAATGG TCGCTGGCCT TTGGGCCGGC GGAATATTTC GCCTTAATGG TTTTTGCCAT CGCCTGTCTT GGCAGCATGA TGGCGCAAAA TCCGCTTAAA TCATTTCTGG CAGCGCTGAT CGGTCTTGGC CTTGCGACCG TCGGCGTGGA CGCCAACACC GGGGTTTATC GCTTTACCTT TGACAGCGTT CATCTTTCCG ACGGCGTACA GTTTATCGTC GTGGTGATCG GCCTGTTCTC GGTATCAGAA ATACTTTTAA TGCTGGAACA TACCAGCAGC GGGCAAACAA TGGTCCGCAA AACGGGTCGA ATGTTATTCA ACCTGAAAGA AGGCGCGCAG TGTATCGGCA CCACCCTGCG TTCTTCGGTA ATCGGCTTTT TTGTCGGCGT ATTGCCCGGC GCCGGGGCGA CCATTGCCAG CGCCATTACC TATATGACCG AGAAAAAACT CAGCGGCAAC AGCGATAGCT TCGGCAAAGG GGATATTCGC GGCGTCGCGG CGCCGGAGGC GGCAAACAAC GCCTCTGCCT GCGGCTCCTT CATCCCGATG CTGACGCTGG GCGTTCCCGG TTCCGGTACT ACGGCAGTGA TGATGGGGGC GCTGACGCTG TACAACATCA CGCCAGGCCC GGCGATGTTC ACCGAACAGC CGGATATCGT CTGGGGACTC ATCGCTGCGC TGCTGATTGC GAACGTGATG CTGCTGATCA TGAATATCCC GTTGATCGGT CTGTTCACCC GTATGCTCAC CATTCCGCTG TGGTTCCTGG TACCCGCCAT CGCTGCCGTA TCGGCGGTAG GGGTGTATGC GGTACACAGC ACCACCTTCG ATCTGGTGCT GATGGTCGCG CTCGGCGTGT TAGGGTACAT TTTACGTAAA ATGCACTTCC CCATGTCACC GCTGATCCTG GGGTTCGTAC TGGGGGAAAT GCTGGAGCAA AACCTGCGTC GCGCACTCTC CATCAGTAAC GGCAATATGG CGATTTTGTG GCAAAGCGGC GTTGCCAAAG CCCTGCTGAT CATGGCGATC ATGGTCATTG TCGTACCGCC AGTGTTACGT CTGCTCCGTA AACACAGCCG TAAACCGCAG GTTGACGCCG GTTAA
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Protein sequence | MDTWIYLSQG FAVAMTPENL VIALIGCFVG TIVGLLPGLG PINGVAILLP LAFALHLPAE SALILLATVY IGCEYGGRIS SILLNVPGDA AAIMTALDGY PMAQQGKGGV ALSISAVSSF FGSLIAIGGI ILFAPLLAQW SLAFGPAEYF ALMVFAIACL GSMMAQNPLK SFLAALIGLG LATVGVDANT GVYRFTFDSV HLSDGVQFIV VVIGLFSVSE ILLMLEHTSS GQTMVRKTGR MLFNLKEGAQ CIGTTLRSSV IGFFVGVLPG AGATIASAIT YMTEKKLSGN SDSFGKGDIR GVAAPEAANN ASACGSFIPM LTLGVPGSGT TAVMMGALTL YNITPGPAMF TEQPDIVWGL IAALLIANVM LLIMNIPLIG LFTRMLTIPL WFLVPAIAAV SAVGVYAVHS TTFDLVLMVA LGVLGYILRK MHFPMSPLIL GFVLGEMLEQ NLRRALSISN GNMAILWQSG VAKALLIMAI MVIVVPPVLR LLRKHSRKPQ VDAG
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