Gene SNSL254_A2984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2984 
Symbol 
ID6486164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2912664 
End bp2914178 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content57% 
IMG OID642738300 
Productintegral membrane protein 
Protein accessionYP_002042029 
Protein GI194442858 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.533441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCT GGATATATCT TTCTCAGGGC TTTGCGGTGG CGATGACGCC GGAAAACCTG 
GTTATCGCGT TGATTGGCTG CTTCGTGGGC ACGATTGTCG GTCTGCTGCC GGGCCTGGGA
CCGATCAACG GCGTGGCAAT CTTACTGCCG CTGGCCTTTG CGTTGCATCT GCCTGCGGAG
TCGGCGCTAA TTCTGCTGGC GACGGTGTAC ATTGGGTGTG AGTATGGCGG CAGGATCTCC
TCCATATTGC TCAATGTCCC CGGCGATGCG GCGGCGATCA TGACGGCGCT GGACGGTTAC
CCGATGGCGC AGCAAGGGAA AGGCGGCGTA GCGCTGTCGA TTTCCGCAGT CAGCTCATTT
TTCGGTTCAT TAATCGCTAT CGGCGGCATC ATTCTATTCG CCCCTTTACT GGCGCAATGG
TCGCTGGCCT TTGGGCCGGC GGAATATTTC GCCTTAATGG TTTTTGCCAT CGCCTGTCTT
GGCAGCATGA TGGCGCAAAA TCCGCTTAAA TCATTTCTGG CAGCGCTGAT CGGTCTTGGC
CTTGCGACCG TCGGCGTGGA CGCCAACACC GGGGTTTATC GCTTTACCTT TGACAGCGTT
CATCTTTCCG ACGGCGTACA GTTTATCGTC GTGGTGATCG GCCTGTTCTC GGTATCAGAA
ATACTTTTAA TGCTGGAACA TACCAGCAGC GGGCAAACAA TGGTCCGCAA AACGGGTCGA
ATGTTATTCA ACCTGAAAGA AGGCGCGCAG TGTATCGGCA CCACCCTGCG TTCTTCGGTA
ATCGGCTTTT TTGTCGGCGT ATTGCCCGGC GCCGGGGCGA CCATTGCCAG CGCCATTACC
TATATGACCG AGAAAAAACT CAGCGGCAAC AGCGATAGCT TCGGCAAAGG GGATATTCGC
GGCGTCGCGG CGCCGGAGGC GGCAAACAAC GCCTCTGCCT GCGGCTCCTT CATCCCGATG
CTGACGCTGG GCGTTCCCGG TTCCGGTACT ACGGCAGTGA TGATGGGGGC GCTGACGCTG
TACAACATCA CGCCAGGCCC GGCGATGTTC ACCGAACAGC CGGATATCGT CTGGGGACTC
ATCGCTGCGC TGCTGATTGC GAACGTGATG CTGCTGATCA TGAATATCCC GTTGATCGGT
CTGTTCACCC GTATGCTCAC CATTCCGCTG TGGTTCCTGG TACCCGCCAT CGCTGCCGTA
TCGGCGGTAG GGGTGTATGC GGTACACAGC ACCACCTTCG ATCTGGTGCT GATGGTCGCG
CTCGGCGTGT TAGGGTACAT TTTACGTAAA ATGCACTTCC CCATGTCACC GCTGATCCTG
GGGTTCGTAC TGGGGGAAAT GCTGGAGCAA AACCTGCGTC GCGCACTCTC CATCAGTAAC
GGCAATATGG CGATTTTGTG GCAAAGCGGC GTTGCCAAAG CCCTGCTGAT CATGGCGATC
ATGGTCATTG TCGTACCGCC AGTGTTACGT CTGCTCCGTA AACACAGCCG TAAACCGCAG
GTTGACGCCG GTTAA
 
Protein sequence
MDTWIYLSQG FAVAMTPENL VIALIGCFVG TIVGLLPGLG PINGVAILLP LAFALHLPAE 
SALILLATVY IGCEYGGRIS SILLNVPGDA AAIMTALDGY PMAQQGKGGV ALSISAVSSF
FGSLIAIGGI ILFAPLLAQW SLAFGPAEYF ALMVFAIACL GSMMAQNPLK SFLAALIGLG
LATVGVDANT GVYRFTFDSV HLSDGVQFIV VVIGLFSVSE ILLMLEHTSS GQTMVRKTGR
MLFNLKEGAQ CIGTTLRSSV IGFFVGVLPG AGATIASAIT YMTEKKLSGN SDSFGKGDIR
GVAAPEAANN ASACGSFIPM LTLGVPGSGT TAVMMGALTL YNITPGPAMF TEQPDIVWGL
IAALLIANVM LLIMNIPLIG LFTRMLTIPL WFLVPAIAAV SAVGVYAVHS TTFDLVLMVA
LGVLGYILRK MHFPMSPLIL GFVLGEMLEQ NLRRALSISN GNMAILWQSG VAKALLIMAI
MVIVVPPVLR LLRKHSRKPQ VDAG