| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2969 |
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| Symbol | |
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| ID | 6486674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2894211 |
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| End bp | 2897867 |
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| Gene Length | 3657 bp |
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| Protein Length | 1218 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642738286 |
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| Product | ATP binding cassette |
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| Protein accession | YP_002042015 |
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| Protein GI | 194442710 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.00365409 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCGA CTCATTCCCC CATGCCCGCT CGTGCCTGGA TAGTTCGCCT TGCCCGCGTG
TGTTGGGAAC GTAAAACACT GAGCATCATT GTCATCGTAG CATCAGTATC GACCATTTTA
CTGGCTGCGC TGACGCCGCT AATAACGCGT CAGGCCGTCA ATGACGCGAT AGCAGGCGAT
ACAACCCACC TGCCGTTACT TGCCTGCGGC CTGATATTAA TTGCCCTTTT TGATTTTATC
GGGAATTACG TGCGCCGCGG CTATGCCGGG GAACTCTCGC TGTGGGTTCA GCATACGTTA
CGTAGCCGTG CGTTCGACAG TATTCAGAAA CTGGACGGCG CAGGCCAGGA CGCCTTGCGT
ACCGGGCAGG TCATTTCGCG TACCAACAGC GATCTTCAAC AGGTACACAC CTTGCTACAG
ATGTGTCCGG TGCCGCTGGC GGTGCTCACT TACTATGTGG CCGGTATCGC GGTGATGCTA
TGGATGTCGC CATCCATGAC GCTTATCGTG ATTTGCGTAC TGGCCGCTCT TGCTATTATC
GCCCTGCGCG CCCGTCGCCG TGTTTTCGCG CAAACGGGGC TTGCCTCAGA CCGGCTGGCG
CACATGACGG AACATATGCG CGAAGTATTG GAACAGATCT CAGTGGTGAA GTCCTGCGTG
GCGGAGTTAC GTGAAACGCG TTGGCTCGAT GGTCAGTCGC GGCAGATGGT GCGGGTACGC
ATCGGTGCCG CTATCTCGCA GGCGATGCCG GGCGCAACCA TGCTGGCGCT ACCGGTGATA
GGGCAGATCG TCCTGCTGTG CTATGGCGGC TGGTCGGTGA TGAACGGGCG CATCGATCTG
GGAACCTTCG TTGCGTTCGC GAGTTTTCTC GCTATGCTGA CCGGCCCTAC CCGCGTACTG
GCATCGTTTT TGGTTATCGC ACAGCGCACA CAGGCGTCGG TGGAGCGCGT CTTCGCGCTT
ATCGACACGC GTTCTCGCAT GGAAGACGGT ACTGAGTCGG TTGAAGGTCA GATTATCGGG
CTGGACGTGG AGAAGATGAG TTTCCACTAC GACAACGGTA ACCGTATCCT CAATGAGATC
TCGTTTTCCA TTCACGCCGG TGAAACCGTG GCAGTGGTTG GCGCCTCCGG CTCCGGAAAA
TCAACATTGC TGATGTTGCT GGCGCGCTTT TACGATCCTA CCTCCGGCGG GGTGTGGCTC
AACACCACTG CGGGCCAACA GAATATTCGC GACCTGAAAC TGACGGCGCT TCGTCGTCGC
GTTGGCGTAG TTTTTGAAGA CGCGTTTCTG TTTGCCGGTA CGGTGGCGGA AAACATCGCC
TATGGGCACC CGCAAGCGAC TCAGGACGAC ATTCGACGCG CCGCCGATGC CGCAGGCGCC
AGCGGGTTCA TCAATGCGCT ACCGCAGGGG TTCAACACCC GACTGACCGA ACGCGGAAGC
AACCTCTCCG GCGGCCAACG CCAGCGTATT GCGCTAGCCC GGGCACTGAT TAGCGCGCCG
GAACTGCTGA TTCTCGATGA CACCACCTCG GCGGTCGATG CCGGTACTGA AGCGGAAATT
AATACGGCTC TTGGTCGTTA TGCCGATAAT GAGCATATGC TGCTGGTGAT TGCACGCCGC
CGTTCAACAC TGCAGTTAGC CGATCGGATC GTCGTACTGG ATAAAGGCCG CGTCGTGGAT
ATCGGTACCC AGGCGGAGCT GGATGCAAGG TGTCCGACGT TTCGCTCGCT GATGAGCGGC
GAGGGGGATT TTCTCGCCCT CGCCCCGGCG GAACAACGTG AGCTATGGCC AACAACGCAG
GCGGTAAAAT CCGACGACGC GCATGAGCGC CAGATACCCG CTGGAAAAGG TTTTGTCGAC
CGAATGACGC GCGTTCCGGA ACGCGCCGTA CAGATGGCGC TGGCAGGCCA CGGGCGTCAA
GTCTCATCGC TGCTGACGCC AGTAGCCTGG ATGTTCGTCA TCGCCGCCCT GCTTATCGCG
CTTGATTCCG CCGCAGGCGT TGGCGTGCTG GTGCTTTTGC AGCGCGGTAT TGACTCAGGC
GTTGCCGCAG GGGATATGTC GACTATTGGC ATATGCGCTC TGCTCGCGCT GTGTCTGGTG
GCGATTGGTT GGTGCTGCTA TGCGCTGCAA ACGATCTTCG CCGCCCGCGC GGCAGAGTCG
GTACAGCATA CGGTACGCTT ACGCAGCTTC AGCCACCTGC TACGCCTGAG TCTTCCCTGG
CACGAGAAGC ACATCGACTC GCGTCTTACT CGCATGACCG TCGACGTTGA TTCACTCGCC
CGATTTCTGC AAAACGGTCT TGCCAGCGCG GCCACCAGCA TCGTGACGAT GGTCGCTATC
GCCGCGGCAA TGTTCTGGCT TGACCCCATT CTTGCATTAA CGGCATTAAG CGCCGTGCCT
GTAGTGGTGC TGGCGACGTG GATTTACCGC CGTTTGAGCT CGCCTGCTTA CGCCCAGGCA
CGGCTGGAAA TTGGTAAGGT GAACAGTACG CTTCAGGAAA AGGTCTCCGG TATGCGGGTA
GTGCAGTCAC ACGGCCAACA GAAGCAGGAA GCCGCCAGGC TACGGGCGTT ATCAGACAAC
TTCCGCGCCA CCCGCGTGCG GGCGCAAAAA TACCTTGCTG TCTATTTTCC GTTCCTGACC
CTCTGCACCG AGGCCGCCTA TGCCGCCGTG CTTTTAATCG GGGCGACCCG GGTCGCCGGA
GGCGAAATGA CGCCCGGGAT ACTGGCGGCG TTCTTCCTGC TACTGGGACA ATTTTATGGC
CCGGTACAGC AGTTGTCAGG CATTGTTGAT TCCTGGCAGC AGGCGACCGC CAGCGGCAAA
CATATCAATG CGCTATTGGC GACTGAGGAA ACGGAGAATA TTGAACCGTC CTCCATAACG
CCTGGCACTG GCGGCGCGCT ACGTCTGGAG GCATTGACAT TCCGCTATCC CGAAAAAACG
CAACCTGTGC TTGATAATCT CTCGCTCACC ATTCCGCCAG GAACGGTAGT CGCGGTGGTC
GGACGTAGCG GCGCCGGCAA ATCGACGCTG ATCAAGCTGC TGGCCGGGCA CTACTCTCCC
GGCAGCGGGC AAATCCGTGT CGGTGAGCGC CTAATTGATG CCGCGTCGCT TAGTGATTAT
CGTCGCCAGA CGGGGCTGGT CACTCAGGAT GTCGCATTAT TTAGCGGCGA TATTGCCGAA
AATATCCGCT ATTCGCGGCC AGACAGCAGC GACACGGAGG TGGAGATCGC GGCGCGACAG
GCGGGACTCT TTGAAACTGT GCAACATCTG CCGCTGGGGT TTCGTACTCC GGTCAATAAC
GGCGGCACGG ATCTGTCCGC GGGCCAGCGT CAGTTGATTG CCCTCGCCCG CGCCCAACTG
GCGCAGGCGC ACATTCTGCT GCTCGACGAG GCGACAGCGC GTATCGACCG CAGCGCCGAG
GAGCGCTTAA TAACCTCGCT TACCGGAGTG ACGCATACCG AGAAACGCAT CGCGCTTATC
GTCGCGCACC GGCTGACCAC CGCCCGCCGC TGCGATGTTA TTGTCGTAAT CGATAAAGGA
TGTATCGCTG AATATGGCAG CCATGAGCAG TTGATAGCGG CTCATGGCCT GTATGCTCGT
CTGTGGCGGG CCAGCGTCGG CCAGACACGC GATACGCAAG GAGAGGTCGT AGGATAG
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| Protein sequence | MPATHSPMPA RAWIVRLARV CWERKTLSII VIVASVSTIL LAALTPLITR QAVNDAIAGD
TTHLPLLACG LILIALFDFI GNYVRRGYAG ELSLWVQHTL RSRAFDSIQK LDGAGQDALR
TGQVISRTNS DLQQVHTLLQ MCPVPLAVLT YYVAGIAVML WMSPSMTLIV ICVLAALAII
ALRARRRVFA QTGLASDRLA HMTEHMREVL EQISVVKSCV AELRETRWLD GQSRQMVRVR
IGAAISQAMP GATMLALPVI GQIVLLCYGG WSVMNGRIDL GTFVAFASFL AMLTGPTRVL
ASFLVIAQRT QASVERVFAL IDTRSRMEDG TESVEGQIIG LDVEKMSFHY DNGNRILNEI
SFSIHAGETV AVVGASGSGK STLLMLLARF YDPTSGGVWL NTTAGQQNIR DLKLTALRRR
VGVVFEDAFL FAGTVAENIA YGHPQATQDD IRRAADAAGA SGFINALPQG FNTRLTERGS
NLSGGQRQRI ALARALISAP ELLILDDTTS AVDAGTEAEI NTALGRYADN EHMLLVIARR
RSTLQLADRI VVLDKGRVVD IGTQAELDAR CPTFRSLMSG EGDFLALAPA EQRELWPTTQ
AVKSDDAHER QIPAGKGFVD RMTRVPERAV QMALAGHGRQ VSSLLTPVAW MFVIAALLIA
LDSAAGVGVL VLLQRGIDSG VAAGDMSTIG ICALLALCLV AIGWCCYALQ TIFAARAAES
VQHTVRLRSF SHLLRLSLPW HEKHIDSRLT RMTVDVDSLA RFLQNGLASA ATSIVTMVAI
AAAMFWLDPI LALTALSAVP VVVLATWIYR RLSSPAYAQA RLEIGKVNST LQEKVSGMRV
VQSHGQQKQE AARLRALSDN FRATRVRAQK YLAVYFPFLT LCTEAAYAAV LLIGATRVAG
GEMTPGILAA FFLLLGQFYG PVQQLSGIVD SWQQATASGK HINALLATEE TENIEPSSIT
PGTGGALRLE ALTFRYPEKT QPVLDNLSLT IPPGTVVAVV GRSGAGKSTL IKLLAGHYSP
GSGQIRVGER LIDAASLSDY RRQTGLVTQD VALFSGDIAE NIRYSRPDSS DTEVEIAARQ
AGLFETVQHL PLGFRTPVNN GGTDLSAGQR QLIALARAQL AQAHILLLDE ATARIDRSAE
ERLITSLTGV THTEKRIALI VAHRLTTARR CDVIVVIDKG CIAEYGSHEQ LIAAHGLYAR
LWRASVGQTR DTQGEVVG
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