Gene SNSL254_A2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2843 
Symbol 
ID6482835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp2776225 
End bp2777334 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content52% 
IMG OID642738166 
Productgifsy-1 prophage protein 
Protein accessionYP_002041899 
Protein GI194443699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.907733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.121957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA CAAATATTGT TACCACTGAG CAGCAGGCAC CAAACACCAT TTCTGCCAGT 
AACGCAATTT TTAACGTTCA GGCACTGGGT CAGTTAACAG CTTTCGCTAA CCTGATGGCA 
GACTCACAGG TGACGGTACC GGCACACCTT GCAGGGAAAC CAGCCGACTG TATGGCTATC 
GTCATGCAGG CTATGCAATG GGGCATGAAC CCTTACGCTG TGGCTCAGAA AACACACCTG 
GTTAACGGTG TTCTTGGTTA CGAGGCACAA CTGGTCAACG CAGTAATCGC AAGCTCCAGT 
GCCATTCATG GCCGTTTTCA TTACCGCTAT GGGGGTGACT GGGAGCGCTG CACCAGGACA 
CAGGAAATCA CACGCGATAA AAACGGTAAA AATGGGAAGT ACACCGTCAC TGAGCGCGTT 
CGTGGCTGGA CGGATGAGGA CGAGATCGGC CTGTTCGTTC AGGTTGGTGC CATTCTGCGA 
GGTGAATCTG AAATCACCTG GGGAGAACCT CTTTACCTCT CCGGCGTTGT TACCCGCAAT 
TCTCCGCTAT GGGTTTCAAA CCCTAAACAG CAAATTGCCT ATCTGGGCGT TAAATATTGG 
GCTCGCCTGT ACTGCCCGGA AGTGATCCTC GGCGTGTACA GCCCTGATGA GGTTGAGCAA 
CGAGAAGAAC GCGAGATTAA CCCTGCTCCA GTCCAGCGCA TGAGCGTACA GGAAATCACC 
AGCGAGGTTA GCACCAGGAC CAGCGCGCAG GAGTCGGCAG CTAACGTTGA TGCTGTTGCC 
GACGATCTTC GCGAACGCAT TGATACAGCA AGTTCCGTTG ATCAGGCAAA AGCAATCCGT 
GCGGATATCG AATCACAGAA AGCGTTGCTG GGTACTGCGC TGTTCACCGA ATTAAAAAAC 
AAAGCAGTGA AGCGCTATTA CCAGGTCAAT GCACAGAACA AAGTCGAGGC AGTGATCAAC 
TCAATTCCAA ACCCTGGCGA ACCGGAAGCC GCAGAGATGT TTGCTAAAGC TGAAAGCACG 
CTTGGCGCTG CTAAACGTCA TCTTGGCGAC GAACTGCACG ATAAGTACCG CGTCCCCCTG 
GACGATATGA AACCGGAATA CATCGGCTAA
 
Protein sequence
MENTNIVTTE QQAPNTISAS NAIFNVQALG QLTAFANLMA DSQVTVPAHL AGKPADCMAI 
VMQAMQWGMN PYAVAQKTHL VNGVLGYEAQ LVNAVIASSS AIHGRFHYRY GGDWERCTRT 
QEITRDKNGK NGKYTVTERV RGWTDEDEIG LFVQVGAILR GESEITWGEP LYLSGVVTRN 
SPLWVSNPKQ QIAYLGVKYW ARLYCPEVIL GVYSPDEVEQ REEREINPAP VQRMSVQEIT 
SEVSTRTSAQ ESAANVDAVA DDLRERIDTA SSVDQAKAIR ADIESQKALL GTALFTELKN 
KAVKRYYQVN AQNKVEAVIN SIPNPGEPEA AEMFAKAEST LGAAKRHLGD ELHDKYRVPL 
DDMKPEYIG