| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2812 |
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| Symbol | |
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| ID | 6483123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2752369 |
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| End bp | 2753865 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642738135 |
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| Product | gifsy-1 prophage head-tail preconnector gp5 |
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| Protein accession | YP_002041869 |
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| Protein GI | 194445600 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.779132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACGTA ATCTCTCGCA CATCATCAGC CAGGCAACCA GTGCTCCGTT GCTGCTTGAA
CCCGCCTATG CGCGGGTTTT CTTTTGCGCG CTGGGCAGGG AGTCAGGCAT TAACAGCCTG
CACATTCCCG GTAATAACGA AAGTCTGGAT CAGTCGGATA TGGCACTGGT CACAGGCGAT
TTTATGGCGA CCGGAAAGCC GCAGGCACGT TTTTATCAGG TAGTGAACGG TATTGCGGTA
TTACCCGTGA CCGGAACACT GGTTCATAAA CTCGGCGGAA TGCGTCCCTT TTCAGGGATG
ACCGGATATG ACGGTGTCAC TGCCCGGCTA CAACAGGCGG TTTCAGATCC GGAGGTAAAA
GGCATTCTGC TGGATATTGA CAGTCCCGGC GGTCAGGCTG CCGGGGCGTT TGACTGTGCT
GACATGATTT ACCGGATGCG CGAACAGAAA CCTGTCTGGG CACTGGCAAA TGAAACAGCC
TGTTCGGCGG CCATGTTGCT GGCGGCAGCC TGTTCGCACC GCCTTGTGAC CCAGACGTCC
AGAATGGGAT CAATTGGTGT GGTGATGGCG CATACCAGCT ACGCCGAAAA ACTGAAACAG
GAAGGGATCG ATATCACCCT TATCTATTCT GGCGCACACA AGGCTGATCT GACGCCCAGC
CAGAAATTAC CGGAAAGTGT CTATGCCGAC TACCAGCAGC GAATGGACGA GGCCAGAAAG
ATGTTTGCAG AAAAAGTGGC CCGGTACACG GGGTTGTCTG TCGATGCGGT AATGGCGACG
GAGGCGGCAG TGTATGACGG GCAGGCCATT ATCACTACCG GACTGGCAGA TGGAATGGTG
AATGCTGCTG ACGCCATCGG CGTGATGGCA GAAGCTATCA ACAGTAACAA GACAGGAGGC
ACTATGCCTG AATTAAGTGC AGCTGACGCT GTCACGCAGG AAAACCAGCG CGTAATGGGA
ATTCTGGGTT GCCCGGAGGC CAGGGGGCAT GAGGCACTGG CACAGATGCT GGCCGGGCAG
CCGGGAATGA GCGTTGCTCA GGCGAAGTCT ATTCTGGCTG CCGCCGCGCC GGCGGACACG
ACCAGCACCG CTGACCGTAT CCTTGCCCTG GAAGAAGCTG GTGGTCGGGA AACACTCGCA
CAGACACTGG CGGCCATGCC AGAGATGACG GTGGAACAGG CCAGAACCAT TCTGGCAGCA
TCGCCGATCG CTGCGGCAAC GTCACTTCAT GATGCCGTGA TGGCGCTTGA TGAGGCGAAA
GGCCGTGAAG AGTTGGCGGA AAAACTGGCT GTCATGCCTG GTATGACCAC AGATCAGGCC
CGTGACCTGC TGGCTGCCGC GCCGGACAAA TCCGGTAATG CGGGGCTGAG CATGAACAAC
GCATTTGATG CTTTCATGCA GTCTCATTCC CCGGGCCCCA TATCCGGCGG CAAAGGCCAC
AGTAATGATA CCGAAACGAC GTTGTTGATG AGTATTCCCG GTACTTCAGC CACCTGA
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| Protein sequence | MQRNLSHIIS QATSAPLLLE PAYARVFFCA LGRESGINSL HIPGNNESLD QSDMALVTGD
FMATGKPQAR FYQVVNGIAV LPVTGTLVHK LGGMRPFSGM TGYDGVTARL QQAVSDPEVK
GILLDIDSPG GQAAGAFDCA DMIYRMREQK PVWALANETA CSAAMLLAAA CSHRLVTQTS
RMGSIGVVMA HTSYAEKLKQ EGIDITLIYS GAHKADLTPS QKLPESVYAD YQQRMDEARK
MFAEKVARYT GLSVDAVMAT EAAVYDGQAI ITTGLADGMV NAADAIGVMA EAINSNKTGG
TMPELSAADA VTQENQRVMG ILGCPEARGH EALAQMLAGQ PGMSVAQAKS ILAAAAPADT
TSTADRILAL EEAGGRETLA QTLAAMPEMT VEQARTILAA SPIAAATSLH DAVMALDEAK
GREELAEKLA VMPGMTTDQA RDLLAAAPDK SGNAGLSMNN AFDAFMQSHS PGPISGGKGH
SNDTETTLLM SIPGTSAT
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