| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2805 |
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| Symbol | |
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| ID | 6482390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2748210 |
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| End bp | 2749460 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642738129 |
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| Product | peyer'S patch-specific virulence factor GipA |
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| Protein accession | YP_002041863 |
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| Protein GI | 194442869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.537832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGCTC ATCAGAATGC CTCCTTTCCT CCCCGGCCTG AAGGCCGGGG AGGAAAGGAG
GCGGTTTTCC GGCTAACTGT CTTTTGCATA ATCACATTTT CCTCTTTAAC ATGTGAAGCC
ATGAAACGCG CATATAAATA CCGGTTTTAC CCCACGACTG AGCAGGCTGA GCTTTTAGCT
CAGACGTTCG GTTGTGTGCG TTTCGTCTAC AACTCCATCC TCCGCTGGCG TACCGATGCG
TACTACGAGC GAAAGGAAAA GATCGGTTAC CTACAGGCCA ACGCTCGCCT TACGGCGCTG
AAAAAGGAGC CAGAATTTGC CTGGCTTAAC GACGTTTCCT GCGTTCCCCT CCAGCAGTCT
TTGCGCCACC AACAAACCGC CTTTGCTAAC TTCTTCGCCG GACGGGCTGC ATATCCGGCT
TTCAAAAGCA AACGGCACAA GCAGGCGGCT GAGTTCACTG CGAGCGCGTT TAAATACCGC
GACGGCAAGC TGTACATGGC AAAGAACAAA ATCCCCTTAG ACGTGCGCTG GAGTCGTCCG
CTGCCGTCCG TGCCGTCTAC CGTCACCATT TCCAAAGATG CCGCAGGGCG GTACTTTGTT
TCGTGCCTTT GCGAATTTGA ACCCGCATCA CTGCCGATCA CCTCTTCAAT GGTCGGCATT
GATGTTGGTT TAAAAGATTT GTTCGTCACC GATACCGGAT TCAGGTCCGG CAATCCCCGC
CATACCGCTA AATACGCGGC TCGCCTGGCA CTACTCCAGC GCCGGTTAAG CAAAAAGGCC
AAAGGCTCAA AGAACCGCGC CAAAGCCCAC TTAAAGGTAG CCCGACTCCA CGCGAAAATT
GCTGATTGCC GACTGGATGC CCTGCACAAG GCCACCCGCA AACTGATTAA CGATAACCAA
GTTGTATGCG TCGAATCCCT GAAAGTGAGG AACATGATCC GCAACCCGTC GCTATCCAAA
GCAATAGCAG ACGCGAGCTG GGGCGAACTT GTGCGCCAGC TCCGGTACAA AGGCGAATGG
GCGGGGCGGT CAGTGGTAGC CATTGACCAG TTTTTCCCGT CCTCAAAACG CTGTAGCTGT
TGCGGTTTCA TCATGAAAAA AATGCCTCTT GATGTTCGTA AATGGCAGTG CCCTGAGTGC
GGAACTGACC ACGACCGGGA CGTTAACGCG GCACGTAATA TCAAAGCTGC CGGGCTGGCA
GTGTTAGCCC ACGGAGAGCC TGTAAATCCT GAATCGCTCA AAGCGGCTTA G
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| Protein sequence | MFAHQNASFP PRPEGRGGKE AVFRLTVFCI ITFSSLTCEA MKRAYKYRFY PTTEQAELLA
QTFGCVRFVY NSILRWRTDA YYERKEKIGY LQANARLTAL KKEPEFAWLN DVSCVPLQQS
LRHQQTAFAN FFAGRAAYPA FKSKRHKQAA EFTASAFKYR DGKLYMAKNK IPLDVRWSRP
LPSVPSTVTI SKDAAGRYFV SCLCEFEPAS LPITSSMVGI DVGLKDLFVT DTGFRSGNPR
HTAKYAARLA LLQRRLSKKA KGSKNRAKAH LKVARLHAKI ADCRLDALHK ATRKLINDNQ
VVCVESLKVR NMIRNPSLSK AIADASWGEL VRQLRYKGEW AGRSVVAIDQ FFPSSKRCSC
CGFIMKKMPL DVRKWQCPEC GTDHDRDVNA ARNIKAAGLA VLAHGEPVNP ESLKAA
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