Gene SNSL254_A2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2478 
Symbol 
ID6482279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2402227 
End bp2403423 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content56% 
IMG OID642737813 
Productcompetence damage-inducible protein A 
Protein accessionYP_002041554 
Protein GI194442871 
COG category[R] General function prediction only 
COG ID[COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.360907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATG TGGAAATGCT ATCCACCGGG GATGAGGTGT TGCACGGACA AATCGTTGAC 
ACCAATGCCG CCTGGCTGGC TGATTTTTTC TTTCATCAGG GCGTTCCGTT ATCACGGCGA
AATACGGTAG GCGATAATCT GGACAGTCTG GTCGCTATCT TGCGTGAACG CAGTCAACAT
GCTGATGTTT TGATTGTTAA TGGCGGGTTA GGGCCGACCA GCGATGATTT AAGCGCGCTC
GCCGCGGCAA CGGCAAAAGG CGAAGGATTA GTACTGCACC AGGCGTGGCT GACCGAAATG
GAACGTTACT TTCAGCAGCG TGGTCGCGTG ATGGCGCCGA GCAACCGTAA ACAGGCGGAA
CTGCCTGCCA GCGCGGAGTT TATTAATAAT CCGGTCGGCA CTGCCTGTGG ATTTGCGCTA
CAGCTCAACC GCTGCCTGAT GTTTTTCACC CCCGGCGTAC CGTCGGAATT TAAGGTTATG
GTGGAGAAGG AAATCTTACC GCGGTTACGC GCGCGTTTTT CGCTGCCGGA GCCGCCGCTT
TGCCTGCGGT TAACGACTTT TGGACGTTCA GAAAGTGACC TCGCGCAGCG TCTCGATTCA
CTGCCGTTGC CGCCCGGCGT GACGATGGGG TATCGCTCAT CAATGCCGAT CATTGAACTG
AAATTGACCG GCCCGGCGAC GCAACGGGAG GCGATGCTGG CGTTATGGCC AGAGGTCAAA
CGGGTTGCCG GGCAGAGTCT GATTTTTGAA GGTACGGAAA ATCTGCCGGC GCAAATAGCC
CGCCGCCTGC AGGAAAGGCA GTTGAGTCTG ACGTTGAGCG AGCAATACAC CAGCGGCTTA
CTGGCGCTAC AGCTTTCCCG CGCCGGGGCG CCTGTTCTTG CCAGCGAAGT CGTTCCTTCT
CAGGAAGAGA CGCTGGCGCA AACGGCGCAC TGGACGACAG AACGACGCAG CAATCATTAT
GCCGGTCTGG CGCTGGCCGT GTCGGGGCTG GAAAACGAAC ATCTTAATTT CGCGCTGGCG
ACGCCGGATG GCACGTATGC CTTACGCGTG CGTTTTAGCG CCAATCGGTA TAGTCTGGCA
ATACGTCAGG AGGTCTGCGC GATGATGGCG CTAAATATGC TGCGCCGCTG GCTTAATGGC
GAGGACATTA TCAGCGAGCA TGGCTGGATA GACGTGGTTG AATCATTGAC ATCATAA
 
Protein sequence
MLNVEMLSTG DEVLHGQIVD TNAAWLADFF FHQGVPLSRR NTVGDNLDSL VAILRERSQH 
ADVLIVNGGL GPTSDDLSAL AAATAKGEGL VLHQAWLTEM ERYFQQRGRV MAPSNRKQAE
LPASAEFINN PVGTACGFAL QLNRCLMFFT PGVPSEFKVM VEKEILPRLR ARFSLPEPPL
CLRLTTFGRS ESDLAQRLDS LPLPPGVTMG YRSSMPIIEL KLTGPATQRE AMLALWPEVK
RVAGQSLIFE GTENLPAQIA RRLQERQLSL TLSEQYTSGL LALQLSRAGA PVLASEVVPS
QEETLAQTAH WTTERRSNHY AGLALAVSGL ENEHLNFALA TPDGTYALRV RFSANRYSLA
IRQEVCAMMA LNMLRRWLNG EDIISEHGWI DVVESLTS