| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2387 |
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| Symbol | |
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| ID | 6486126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2303906 |
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| End bp | 2305273 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642737726 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_002041468 |
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| Protein GI | 194442459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.288387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAGTT GCCTTGATAT ATTCAAAATA GTAATAGGTC CATCCAGCTC ACGTACCGTA
GGGCCGATGC GCGCCGCCTG TCACTTTATT TCATTGCTCA GAGAACAAGA GACGTTGCCG
CTAATTCGGG AAATTGAAAT CGAGCTGTAT GGCGCGTTAT CGTTAAGCCG CAAGTGCCAC
AATGTGGATA CCGCCCTGTA TCTTGGGCTG CTGGGTTGCC AGCCGGAGAA TGTCGATCTC
CGTTCGCATA TGGCGGTGAT TAAGCGTGCG GAAAATGAAA ACAAAATCGA ACTCCCGCTC
TCTGACGCGG GCGGAATCAC GATAAAAGTC AAGATTATCG CCAATCACCA GGCGCATCCA
GGCCATCCTT ATGCCATGAC GTTTCGCGCC AGAGATGATT ATTTTACGGT GTATGAAGAG
ACCTGGTTTT CGACCGGCGC CGGACAGGTT CGCAAACATG GCGAGCCGCT GACGCCATCG
CTTCCTTTGC GTACAGTGTC GCCCTTTGAA TTTAGTCATG CCGCGCAGTT GCTGGCGCTG
TGTCGGCGTA ACGGCCTGTC CGTAGCGGCG CTGATGATGA AAAATGAGCT GTGCCGCCAC
TCGCCACAGA CGTTGCAGAA TTATCTGGCG CAAATATGGG ACGTGATGCA GCAGGCGGTT
TATCGCGGCC TGCATACTGA GGGGGTATTA CCCGGCCCCT ATCAGGTACC GCGGCGCGCC
TGTGCGTTAC ATAAGACGTT ACAGGCGAAC CGTTCCGCCA GCGATTTTTT AACCGCGCTG
AACTGGGTCA ATGCCTTCGC GATTGCGGTA AGCGAAGAAA ATGCCAGCGG CGGACAGATT
GTTACCGCGC CAACCAATGG CGCGTGCGGC ATCATTCCGG CAGCGCTCTG CTGGTATGAT
AAATTTGTCA CGCCGCTGGA GCCCGGTGCT CTGACTCGTT TCTTCCTGAC CGCTGCCGCT
ATCGCGATAT TGTTTAAACA AAACGCCTCT ATTCTGGGAT CTGAAGTTGG CTGTCAGGGG
GAAATCGGCG TGGCGTGCTC AATGGCGGCG GCGGGCCTGG CTGAACTGAT GGGCGCATCC
GTGGAGCAAA CGCTGAGCGC CGCTGAAATT GCCATGGAAC ATCATCTGGG ATTGACCTGC
GATCCGCTGG GTGGGCAGGT ACAAATTCCC TGCATAGAGA GAAACGCCAT CTCTGCCGTG
AAAGCGATAA ACGCGGCGAC GATGGCGATG AGTCGCGTAA GCGAACCCTG TATTTCGCTC
GATGAGATCA TTGCTGCGAT GTACGAGACC GGTAAAGACA TGAGCGCTAA ATACCGTGAA
ACGTATCATG GTTCGCTGGG GAAAATTCAG CCGCGCAAGA GAGGGTAA
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| Protein sequence | MESCLDIFKI VIGPSSSRTV GPMRAACHFI SLLREQETLP LIREIEIELY GALSLSRKCH
NVDTALYLGL LGCQPENVDL RSHMAVIKRA ENENKIELPL SDAGGITIKV KIIANHQAHP
GHPYAMTFRA RDDYFTVYEE TWFSTGAGQV RKHGEPLTPS LPLRTVSPFE FSHAAQLLAL
CRRNGLSVAA LMMKNELCRH SPQTLQNYLA QIWDVMQQAV YRGLHTEGVL PGPYQVPRRA
CALHKTLQAN RSASDFLTAL NWVNAFAIAV SEENASGGQI VTAPTNGACG IIPAALCWYD
KFVTPLEPGA LTRFFLTAAA IAILFKQNAS ILGSEVGCQG EIGVACSMAA AGLAELMGAS
VEQTLSAAEI AMEHHLGLTC DPLGGQVQIP CIERNAISAV KAINAATMAM SRVSEPCISL
DEIIAAMYET GKDMSAKYRE TYHGSLGKIQ PRKRG
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