Gene SNSL254_A1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1629 
Symbol 
ID6484964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1593873 
End bp1595060 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content52% 
IMG OID642737015 
Productputative MFS-type transporter YdeE 
Protein accessionYP_002040767 
Protein GI194445537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAG GATTGAGACG TTCGACGTTG GCTCTACTCG CCTCATCGCT GTTATTGACA 
ATTGGACGCG GCGCCACGCT CCCCTTTATG ACCATCTATC TTAACCGTCA GTACGGTTTA 
GGCGTGGATC TGATTGGCTA CGCGCTGACC AGCGCGTTAA CAATCGGCGT CGTCTTTAGT 
CTTGGCTTTG GAATTCTGGC GGACAAGTTT GATAAAAAGC GCTACATGTT ACTCGCAATT 
ATCGCCTTCG CCTGCGGATT TATCGCCATC CCAATGGTGC ATAATGTCGT ACTGGTTGTC 
CTGCTTTTTG CGCTTATTAA CTGCGCCTAT TCGGTTTTTT CTACCGTACT GAAGGCCTGG 
TTTGCCGATA ACCTCACCGC GACAACAAAA ACACGGATTT TTTCGCTCAA CTATACTGTA 
CTCAACATCG GCTGGACGGT TGGCCCGCCG CTCGGCACGC TGCTGGTGAT GCAAAGCATC 
AATTTACCCT TCTGGCTTGC CGCCATCTGT TCCGCATTCC CGCTGGTCTT TATTCAGGTA 
TGGGTGACAC GATCGGTTGC CGCCAGCGAG GGGAAAAATG CCGCTATCTG GTCTCCCTCC 
GTTCTGCTGC GCGACAAAGC ATTATTGTGG TTTACGCTTT CGGCATTTCT GGCCTCCTTT 
GTGGGGGGCG CCTTTGCGTC CTGTATTTCA CAGTACGTTA TGGTCGTTGC CGATAGCGGC 
TTCGCGGAAA AAGTGGTAGC CGTCGTTCTG CCGGTTAATG CGGTTATTGT GGTCAGTTTG 
CAATACGCCG TGGGCCGCCG ACTTACCGCC GTCAATATTC GACCAATGAT GACGACCGGC 
ACCGTCTTTT TTATCGCCGG GCTCATCGGA TTTATTTTTT CAGGCGACAA TCTGTTTTTT 
TGGGGGCTTT CGGCGGCAGT ATTCACGATT GGCGAAATTA TTTATGCCCC CGGCGAATAT 
ATGTTAATTG ACAACATTGC GCCTGCCGGG ATGAAAGCCA GCTATTTTTC AGCGCAATCG 
CTGGGCTGGC TGGGTGCGGC GGTAAACCCG CTGGCCAGCG GCGTCATCCT GACGACGCTT 
CCCGCCTGGT CGCTTTTCGT TGTCCTGATA ATCGCCATTG TGTTCGCCTG GGCACTGATG 
TTAAAAGGAA TGCGGATTAC CCCTACGCAA CAGGCTATCA CCTGTTAA
 
Protein sequence
MNPGLRRSTL ALLASSLLLT IGRGATLPFM TIYLNRQYGL GVDLIGYALT SALTIGVVFS 
LGFGILADKF DKKRYMLLAI IAFACGFIAI PMVHNVVLVV LLFALINCAY SVFSTVLKAW 
FADNLTATTK TRIFSLNYTV LNIGWTVGPP LGTLLVMQSI NLPFWLAAIC SAFPLVFIQV 
WVTRSVAASE GKNAAIWSPS VLLRDKALLW FTLSAFLASF VGGAFASCIS QYVMVVADSG 
FAEKVVAVVL PVNAVIVVSL QYAVGRRLTA VNIRPMMTTG TVFFIAGLIG FIFSGDNLFF 
WGLSAAVFTI GEIIYAPGEY MLIDNIAPAG MKASYFSAQS LGWLGAAVNP LASGVILTTL 
PAWSLFVVLI IAIVFAWALM LKGMRITPTQ QAITC