Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1374 |
Symbol | |
ID | 6486814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1351646 |
End bp | 1352191 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642736768 |
Product | chorismate mutase |
Protein accession | YP_002040522 |
Protein GI | 194445040 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000188427 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.000120257 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCGTC ATATCGCCAT TTTTCTTTGT TCTTTATTGA TGTGCAGCAC CACTTTTGCC GATTCGGTAA CATCGGTATC GCTTGGCGCA CTCTTAACCG CGCTCAATGA ACGCATGTTA TTAATGAAAG ATGTGGCTGC TTATAAAATG AAGCACCATC TGCCGATAGA GGATTTCACG CGTGAACAAA ATGTTTTTGC CGAGGCTGAA GAAGAAGCGA AAAATAACGG TCTGGACCCG CATTCGATAA CCCCTTTTAT TCGTTCGCTA ATGGATGCCA GTAAAGCGAT ACAGTACCGC TATTTAGCGC AGTGGCGAAC CGGCCCAGAA CCCTCCTTTC CGATACAAAC CTTGTCGGTC ACCCGGCAAC GTATTCGACA ACTTGATAAT CAAATGTTGA TCATTATCAG CCAGCGCCTG ATGGTCGGCG CTTTCAGCCA TGAGGATATG GTGTGGCTGA GAACGCACTT TAATGCGCCG AATCTGAATG AGAGCGATAT CAGTGATGTG TTGGCATCTC TGTCTTTGGT GCGACGCGCG CGTTAA
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Protein sequence | MIRHIAIFLC SLLMCSTTFA DSVTSVSLGA LLTALNERML LMKDVAAYKM KHHLPIEDFT REQNVFAEAE EEAKNNGLDP HSITPFIRSL MDASKAIQYR YLAQWRTGPE PSFPIQTLSV TRQRIRQLDN QMLIIISQRL MVGAFSHEDM VWLRTHFNAP NLNESDISDV LASLSLVRRA R
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