| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1366 |
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| Symbol | |
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| ID | 6485587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1345766 |
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| End bp | 1346899 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642736761 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002040516 |
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| Protein GI | 194446184 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0389612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.000813003 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGTATT TAGCACGACT AAATATCGTT GCGATGCTGA TGTCAACGAC GTTCTGGATC
AATCTGGCGG TCGTTTTTTT CGTCACCCTC ATTACTTACT GGCTCATCAA CTGGCTACTC
AATGTGGTCT ATAAAGCGCT ACAACGCCCG GATAAAAAGG ATGATGCTCA TGGGCGGCTG
CGGCCTATTG TTTTCGAGAT GCTGAAAAAG ACCAGTAAGA TGCTCATCTT TTTTGCCGCA
TTTCTCTTTA GCCTGCGCTT TGTCGCCCTG CCCGACCGGT TATTCTCCAC CCTCTCTCAC
GCCTGGTTTT TAGTGGTTGC GATTCAAATG GCGATTTGGC TTGATCAGGG CGTGCAGTCA
TGGATGCGTC ATTTACTGTA TGCCCCAGGC TCCAATAAAA ACCCGGTGAC GTTAGTCATT
CTTGGTATGA TTTTGCGCGT ACTCGTCTGG TCTATGATGC TGCTCTCCAT CCTGGCGAAC
GTCGGCGTGG ATATTACCGC ACTGGTAGCC AGCCTCGGCG TGGGCGGTAT TGCTATTGCC
CTGGCGGTAC AAACCGTTCT GAGCGATGTC TTCGCTTCGC TGTCGATTGG TTTCGATAAG
CCCTTCGAGA TCGGCGATTT CGTCGTCTTT AATGATGTAG CCGGTACGAT TGAACATATC
GGTTTGAAAA CCACTCGCAT CCGTAGCCTC AGCGGCGAAC AGATTGTTTG TGCGAACGCG
CAGTTGTTGC AGCAAACCAT ACACAACTAT AAGCGGATGC AAACGCGTCG TATCGTGTTT
ACTTTTGGCG TCGCCACTGC GACACCGCCG GAAAAGTTAC GCCTCATCGG CGATATGGTG
AAAAAGATTA TTACCGATGT CGGCGAAACA CAATTCGACC GCGCCCATTT GCTGGCCTTT
GGTCAGGATC GGCTGACCTA TGAGGTGGTG CATATCGTCA ATACCGCAGA TTACAATAAA
TACATGGATA TTCAGCAAGA GATAAATATC CGTATTATTG AAAAACTCAT TGAGAATGAT
ATCGAACTGG CGCTGCCAAG TCTGGTCGTC AGAGCCCCTG TACAGGTTGA AGAGACCAGG
GACTACAGTA ATACCGCTGA TGCAAAAAAC GCAGATAAAC GCGTCATGCA GTAA
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| Protein sequence | MEYLARLNIV AMLMSTTFWI NLAVVFFVTL ITYWLINWLL NVVYKALQRP DKKDDAHGRL
RPIVFEMLKK TSKMLIFFAA FLFSLRFVAL PDRLFSTLSH AWFLVVAIQM AIWLDQGVQS
WMRHLLYAPG SNKNPVTLVI LGMILRVLVW SMMLLSILAN VGVDITALVA SLGVGGIAIA
LAVQTVLSDV FASLSIGFDK PFEIGDFVVF NDVAGTIEHI GLKTTRIRSL SGEQIVCANA
QLLQQTIHNY KRMQTRRIVF TFGVATATPP EKLRLIGDMV KKIITDVGET QFDRAHLLAF
GQDRLTYEVV HIVNTADYNK YMDIQQEINI RIIEKLIEND IELALPSLVV RAPVQVEETR
DYSNTADAKN ADKRVMQ
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