| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1277 |
|---|
| Symbol | flgH |
|---|
| ID | 6486631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 1264464 |
|---|
| End bp | 1265129 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642736677 |
|---|
| Product | flagellar basal body L-ring protein |
|---|
| Protein accession | YP_002040434 |
|---|
| Protein GI | 194444848 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG2063] Flagellar basal body L-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.896563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.00216763 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA TGGTCGCGAC GCTGACAGGA TGCGCCTGGA TACCCGCTAA ACCGCTCGTG
CAGGGGGCGA CCACGGCGCA GCCGATACCT GGCCCGGTAC CGGTGGCGAA TGGCTCCATA
TTTCAGTCTG CGCAGCCGAT TAATTATGGC TATCAGCCGC TTTTTGAAGA TCGTCGACCG
CGTAATATCG GCGATACGCT CACGATTGTG TTACAGGAAA ACGTCAGCGC CAGTAAAAGC
TCGTCGGCAA ATGCCAGCCG CGACGGCAAA ACCAGCTTTG GTTTTGATAC GGTACCGCGT
TATCTGCAGG GATTATTCGG TAATTCCCGC GCGGATATGG AGGCCTCCGG CGGCAACTCT
TTTAACGGCA AAGGCGGCGC GAATGCCAGC AATACCTTTA GCGGCACGCT GACCGTGACC
GTCGATCAGG TTCTGGCCAA TGGCAATTTA CACGTCGTGG GGGAAAAACA GATCGCGATT
AATCAGGGAA CGGAATTCAT CCGCTTCTCC GGCGTGGTAA ATCCACGCAC CATCAGCGGC
AGCAACTCCG TTCCCTCGAC ACAGGTGGCG GATGCGCGGA TTGAATATGT CGGGAACGGC
TATATTAACG AAGCGCAAAA TATGGGCTGG CTGCAACGTT TCTTCCTTAA TTTGTCGCCG
ATGTAA
|
|---|
| Protein sequence | MALMVATLTG CAWIPAKPLV QGATTAQPIP GPVPVANGSI FQSAQPINYG YQPLFEDRRP
RNIGDTLTIV LQENVSASKS SSANASRDGK TSFGFDTVPR YLQGLFGNSR ADMEASGGNS
FNGKGGANAS NTFSGTLTVT VDQVLANGNL HVVGEKQIAI NQGTEFIRFS GVVNPRTISG
SNSVPSTQVA DARIEYVGNG YINEAQNMGW LQRFFLNLSP M
|
|---|
| |