Gene SNSL254_A1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1225 
Symbol 
ID6486254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1221800 
End bp1222960 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content41% 
IMG OID642736625 
ProductN-acetylneuraminic acid mutarotase 
Protein accessionYP_002040383 
Protein GI194445375 
COG category[S] Function unknown 
COG ID[COG3055] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03547] mutatrotase, YjhT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.293082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.60575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATGC AGATGAAAAA TTTTAAGAAA ATGATGACGC TAATGGCGCT ATGTTTATCA 
GTCGCTATCA CCACATCAGG ATATGCAACG ACGCTTCCTG ATATACCAGA ACCACTGAAA
AATGGTACTG GCGCTATTGA TAATAATGGC GTGATTTATG TCGGCTTAGG TACCGCAGGG
ACATCCTGGT ATAAAATTGA TCTTAAAAAG CAACATAAAG ACTGGGAGCG TATAAAGTCG
TTTCCTGGTG GAGCTCGTGA GCAATCCGTG TCGGTATTTT TAAATGATGA GCTTTATGTT
TTTGGTGGCG TAGGGAAAAA AAACAGTGAA TCACCGTTGC AGGTTTATAG CGATGTGTAC
AAATACTCAC CGGTGAAAAA TACATGGCAA AAAGTTGACA CTATATCTCC AGTTGGATTA
ACAGGGCATA CGGGAGTAAA ATTAAACGAA ACGATGGTAC TTATTACCGG AGGGGTTAAT
GAGCATATCT TTGATAAGTA TTTTATTGAT ATAGCGGCTG CGGCTGCGGA TGAAAGTGAA
AAAAATAAAG TCATCTATAA TTATTTTAAT AAACCTGCCA AAGATTATTT TTTTAATAAA
ATCGTATTTA TCTACAATGC TAAAGAGAAC ACATGGAAGA ATGCCGGTGA GCTGCCAGAC
GCGGGGACGG CAGGATCGTC ATCGGTAATG GAAAATAATT TCCTGATGCT GATTAATGGT
GAGCTCAAAC CGGGTTTACG TACCGATGTG ATTTACCGCG CCATGTGGGA TAACGACAAG
CTAACATGGT TGAAGAACAG CCAGTTACCG CCATCGCCTG GAGAACAACA GCAAGAAGGG
TTGGCCGGAG CATTTTCGGG CTATAGTCAC GGTGTCCTGC TTGTCGGTGG TGGCGCGAAT
TTTCCGGGAG CAAAACAAAA TTATACCAAT GGAAAGTTTT ATTCCCACGA AGGAATAAAT
AAAAAATGGC GAGATGAAGT TTATGGTTTG GTTAATGGCC ATTGGCAATA TATGGGTAAA
ATGAAACAAC CTCTCGGCTA TGGTGTATCA GTAAGTTATG GTGATGAAGT TTTCCTTATT
GGTGGTGAAA ATGCTAAAGG GAAACCTGTT TCGTCTGTAA CCTCCTTTAC CATGCGTGAT
GGTAATTTAT TAATAAAATA A
 
Protein sequence
MGMQMKNFKK MMTLMALCLS VAITTSGYAT TLPDIPEPLK NGTGAIDNNG VIYVGLGTAG 
TSWYKIDLKK QHKDWERIKS FPGGAREQSV SVFLNDELYV FGGVGKKNSE SPLQVYSDVY
KYSPVKNTWQ KVDTISPVGL TGHTGVKLNE TMVLITGGVN EHIFDKYFID IAAAAADESE
KNKVIYNYFN KPAKDYFFNK IVFIYNAKEN TWKNAGELPD AGTAGSSSVM ENNFLMLING
ELKPGLRTDV IYRAMWDNDK LTWLKNSQLP PSPGEQQQEG LAGAFSGYSH GVLLVGGGAN
FPGAKQNYTN GKFYSHEGIN KKWRDEVYGL VNGHWQYMGK MKQPLGYGVS VSYGDEVFLI
GGENAKGKPV SSVTSFTMRD GNLLIK