Gene SNSL254_A1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1217 
Symbol 
ID6486086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1209481 
End bp1209876 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content58% 
IMG OID642736619 
Productputative secreted protein 
Protein accessionYP_002040377 
Protein GI194445821 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.446531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TTTTCCTTAC CTGCGCGGCG TTGTTGTTCA GCAGTCAGGC GTTGGCCGAT 
GAATGTGCCA GCGCCAGTAC GCAGCTGGAA ATGAATCGCT GCGCCGCCGC GCAATACCAG
GCGGCAGATA AAAAGCTGAA CGAAACCTAT CAAAGCGCGA TTAAGCGTGC GCAACCGCCG
CAGCGCGAGC TGTTGCAAAA AGCGCAGGTG GCATGGATTG CACTGCGGGA CGCCGATTGC
GCTCTGATTC GCTCAGGTAC GGAGGGCGGC AGCGTGCAAC CCATGATCGC CAGCCAGTGC
CTGACCGATA AAACGAACGA ACGCGAAGCG TTTTTAGCCT CGCTGCTGCA ATGTGAAGAG
GGTGATTTGA GCTGCCCACT GCCGCCAGCC GGTTAA
 
Protein sequence
MKRIFLTCAA LLFSSQALAD ECASASTQLE MNRCAAAQYQ AADKKLNETY QSAIKRAQPP 
QRELLQKAQV AWIALRDADC ALIRSGTEGG SVQPMIASQC LTDKTNEREA FLASLLQCEE
GDLSCPLPPA G