Gene SNSL254_A1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1113 
Symbol 
ID6486000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1123572 
End bp1124177 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID642736516 
ProductTfoX family protein 
Protein accessionYP_002040275 
Protein GI194442968 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00655233 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.000555107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGCAC TCTCTTATGA CAGGATCTAT AAATCGCAAG AATATTTGGC CTCTTTGGGG 
ACGATCCAGT ATCGATCTTT ATTCGGTAGC TATAGTCTGA CCGTGGAGGA TACCGTCTTT 
GCGATGGTGG CTAATGGCGA GCTTTATCTC CGCGCCTGTG AAGAAAGCGT ACCCTACTGT 
GTGAAGCATC CTCCCGCCTG GCTCATGTTT ATGAAGTGTG GACGTCCCGT TATGCTCAAC 
TATTACCGGG TGGATGAAAG CCTGTGGCGC GATCAGCAGC AGCTGGTGCG TTTATCGAAG 
TATTCTCTTG ACGCGGCAAT GAAGGAAAAA CACAGCCGTA TTTTACAGCA CAGACTCAAA 
GATCTCCCCA ATATGACCTT CCATCTGGAA ACATTGCTCA ATGAGTCAGG GATAAAGGAC 
GAAAATATGT TACGCATACT GGGCGCGAAA ATGTGCTGGC TAAGGTTGCG ACAAAGCAAT 
CCCTTGCTGA CGGTGAAAGT TTTGTATGCC CTGGAAGGCG CAATTGTCGG CGTACATGAA 
GCGGCGCTCC CGGCGAGTCG TCGCCAGGAG CTTGCCGACT GGGCTCATTC GCTTACGGCT 
GGGTAA
 
Protein sequence
MRALSYDRIY KSQEYLASLG TIQYRSLFGS YSLTVEDTVF AMVANGELYL RACEESVPYC 
VKHPPAWLMF MKCGRPVMLN YYRVDESLWR DQQQLVRLSK YSLDAAMKEK HSRILQHRLK 
DLPNMTFHLE TLLNESGIKD ENMLRILGAK MCWLRLRQSN PLLTVKVLYA LEGAIVGVHE 
AALPASRRQE LADWAHSLTA G