| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0975 |
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| Symbol | |
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| ID | 6486573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 979124 |
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| End bp | 980074 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642736381 |
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| Product | VirK-like protein |
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| Protein accession | YP_002040141 |
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| Protein GI | 194443072 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2990] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.587318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 92 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC TTACAGATAA TACCTGGTAC ACTTCAGATT ACATCTCTCC TTTACAATTA
TTTATTCGTC TGACGCGCGG GCAATTACAG CCAGGAAAAT TCTGGCGTAA AGCCAGCTTT
CGTCGCAAGT TTTTAATCCG CTCATTAGTC ATGCCGCGTG CGACCAGCCA ATTACTGACC
AATCTCACCC AATGGCCGGA GTTAAATACG TTACTTGCTC GTCAGCCGCG TTTGCCTATT
CGGCTACATC GTCCTTATAT GGCTGTAAAT ATTAAACGCG ATTTCGCCTT AGATGCGCTG
TGTTTTCATT ATCAACAGAT GCGCCAACTT TTATCGCGGG AACAACAAGT TAGCTATTTA
AGTCAGTATG GCCTGAATCT TGCTAAATTT GAAACTAAAA CCGGCGAGTT GTTTCAACTT
GATTTAGTCA GTCTGGTCTC ACTGGATAAA GAAGGTGAAA GCACTATTGT TGTTCGCGAC
GCACAGTTAC GTATTCTGGC AGAGATCACA TTTACCCTGT GTCGCTTTAA CCAACAACGC
ACACTATTTA TCGGCGGATT ACAGGGCGCG GCAAACGACG TCCCTCACGA AATTATCCAG
CAGGCGACCA AAGCCTGCCA TGGTCTTTTT CCCAAACGCA TCGTGATGGA GGCTCTCTGT
CAGTTTGCGC AAGTCTTTCA GGCAGAAAAG ATTATAGCTG TGAGTAACGA TGCGCACGTT
TACCGTAGCT GGCGATACAT GGATAAAAAG ACGCAAATGC ATGCCGACTA TGACGCGTTT
TGGGAATCGT TAGGCGGTGA AAGAATTAAA GGGAATTACT ATACGCTGCC GCTGGCGATC
GCCCGAAAAA GCGAAGCGGA GATCGCCAGT AAAAAACGGG CCGAGTATCG CCGCCGCTAT
GCATTACTCG ATAGCGTCGT CGAACAGGTT CCGGCCACAT TCAAACATTA A
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| Protein sequence | MTQLTDNTWY TSDYISPLQL FIRLTRGQLQ PGKFWRKASF RRKFLIRSLV MPRATSQLLT
NLTQWPELNT LLARQPRLPI RLHRPYMAVN IKRDFALDAL CFHYQQMRQL LSREQQVSYL
SQYGLNLAKF ETKTGELFQL DLVSLVSLDK EGESTIVVRD AQLRILAEIT FTLCRFNQQR
TLFIGGLQGA ANDVPHEIIQ QATKACHGLF PKRIVMEALC QFAQVFQAEK IIAVSNDAHV
YRSWRYMDKK TQMHADYDAF WESLGGERIK GNYYTLPLAI ARKSEAEIAS KKRAEYRRRY
ALLDSVVEQV PATFKH
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