Gene SNSL254_A0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0911 
Symbol 
ID6482382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp915667 
End bp918099 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content56% 
IMG OID642736322 
Productformate C-acetyltransferase 3 
Protein accessionYP_002040082 
Protein GI194443020 
COG category[C] Energy production and conversion 
COG ID[COG1882] Pyruvate-formate lyase 
TIGRFAM ID[TIGR01774] pyruvate formate-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC TGAAACTGGA CACGCTCAGT GACCGCATTA AGGCGCACAA AACCGCGCTG 
GTACATATCG TGAAACCGCC GGTCTGTACC GAACGCGCGC AGCATTATAC CGAAATGTAC
CAGCAGCATC TGGATAAACC GATTCCGGTA CGCCGTGCGC TGGCGCTGGC CCATCACCTG
GCGGAACGCA CTATCTGGAT AAAACACGAT GAACTGATCG TCGGCAACCA GGCAAGTGAA
GTCCGGGCCG CGCCGATTTT CCCGGAATAT ACCGTCTCGT GGATTGAAAA AGAGATCGAC
GACCTGGCGG ACCGGCCCGG CGCAGGTTTT TCCGTAAGTG AAGAAAACAA ACGTATTCTG
CACGACGTCT GTCCGTGGTG GCGCGGTCAA ACCGTCCAGG ATCGCTGCTA CGGCATGTTT
ACCGATGAAC AAAAAGGGCT TCTGGCGACT GGCATTATCA AAGCCGAAGG CAATATGACT
TCCGGTGACG CGCACCTGGC GGTGAACTTC CCGCTGCTGC TGGAGAAAGG GCTTGATGGC
CTGCGCGATA AAGTCGCCGA GCGCCGCTCA CGCATCAACC TGACCGTGCT GGAAGATCTG
CATGGCGAGC AGTTCCTGAA GGCGATTGAT ATAGTGCTGG ACGCGGTAAG CCAGCATATC
ATGCGCTTTG CCGCGCTGGC GCGCCAGATG GCGGGCGAAG AGTCCCGTGA AAGCCGTCGT
AAAGAGCTAC TCACCATCGC GGAAAACTGC GAGGTGATCG CTCACGAACC GCCGCAGACC
TTCTGGCAAG CACTGCAATT GTGCTACTTC ATCCAACTGA TTCTACAAAT TGAGTCTAAC
GGTCACTCGG TGTCATTTGG TCGTATGGAC CAGTATCTTT ACCCCTATTA TCGTCGCGAT
GTCGAACTAA ACCAGACGCT GGATCGTGAG CACGTCATTG AACTGCTGCA CAGCTGCTGG
CTGAAACTGC TGGAAGTAAA CAAGATCCGT TCCGGTTCGC ACTCTAAAGC TTCCGCGGGC
AGCCCGCTGT ATCAAAACGT CACCATTGGC GGTCAGAATC TCATCAACGG TCAGCCAATG
GACGCAGTGA ATCCACTGTC TTACGCCATT CTGGAGTCCT GCGGACGTCT GCGTTCTACC
CAGCCCAACC TCAGTGTGCG TTATCACGCC GGAATGAGTA ACGATTTCCT TGACGCCTGC
GTCCAGGTCA TCCGCTGCGG CTTTGGGATG CCGGCGTTTA ACAATGATGA AATCGTCATC
CCGGAATTTA TCAAGTTGGG GATCGAACCA CAGGACGCTT ACGATTACGC GGCGATCGGC
TGTATCGAAA CCGCCGTCGG CGGGAAATGG GGTTATCGCT GCACCGGCAT GAGCTTTATT
AACTTCGCCC GCGTCATGCT GGCGGCGCTG GAAGGCGGTC GCGACGCCAC CAGCGGCAAG
GTATTTCTGC CGCAGGAAAA GGCGCTCTCC GCAGGCAACT TTAACAATTT TGACGAAGTG
ATGGCCGCCT GGGATACCCA AATTCGCTAC TACACGCGCA AATCGATCGA AATTGAGTAT
GTGGTCGACA CCATGCTGGA AGAGAACGTC CACGATATTC TGTGCTCAGC GCTGGTAGAT
GACTGTATTG AACGCGCGAA GAGTATCAAG CAAGGCGGCG CTAAATATGA CTGGGTATCC
GGTCTCCAGG TCGGTATCGC CAACCTGGGC AACAGCCTCG CCGCCGTGAA AAAACTGGTC
TTCGAACAGG GCGTTATCGG TCAACAGCAG CTTGCCGCCG CGCTGGCCGA TGACTTTGAC
GGGCTGACCC ATGAGCAGCT GCGCCAGCGT CTGATTAACG GCGCGCCGAA GTACGGTAAC
GACGATGACA GTGTCGATAC CCTGCTGGCG CGCGCTTATC AGACCTATAT TGATGAGCTG
AAGCAATACC ATAACCCGCG CTACGGTCGT GGCCCTGTGG GCGGCAACTA TTACGCCGGT
ACGTCCTCTA TCTCAGCAAA CGTGCCGTTT GGCGCCGCGA CTATGGCTAC CCCGGATGGT
CGCAAAGCGC ATACACCGCT GGCGGAAGGC GCAAGCCCTG CATCGGGTAC GGATCATCTC
GGCCCGACGG CGGTGATCGG TTCCGTAGGC AAATTACCTA CCGGTTCCAT TCTCGGCGGC
GTGCTGCTCA ATCAGAAACT GAACCCAACG ACGCTGGAAA ACGAATCCGA CAAACAGAAA
CTGATGGTTC TGCTACGGAC GTTCTTTGAG GTGCATAAAG GCTGGCATAT TCAGTACAAC
ATCGTGTCAC GCGAAACGCT GTTGGATGCG AAAAAACATC CGGACCAGTA CCGCGATCTG
GTCGTGCGTG TGGCAGGCTA CTCCGCCTTC TTCACCGCGC TGTCGCCGGA TGCGCAGGAC
GATATCATCG CCCGTACCGA ACATATGCTG TAA
 
Protein sequence
MTQLKLDTLS DRIKAHKTAL VHIVKPPVCT ERAQHYTEMY QQHLDKPIPV RRALALAHHL 
AERTIWIKHD ELIVGNQASE VRAAPIFPEY TVSWIEKEID DLADRPGAGF SVSEENKRIL
HDVCPWWRGQ TVQDRCYGMF TDEQKGLLAT GIIKAEGNMT SGDAHLAVNF PLLLEKGLDG
LRDKVAERRS RINLTVLEDL HGEQFLKAID IVLDAVSQHI MRFAALARQM AGEESRESRR
KELLTIAENC EVIAHEPPQT FWQALQLCYF IQLILQIESN GHSVSFGRMD QYLYPYYRRD
VELNQTLDRE HVIELLHSCW LKLLEVNKIR SGSHSKASAG SPLYQNVTIG GQNLINGQPM
DAVNPLSYAI LESCGRLRST QPNLSVRYHA GMSNDFLDAC VQVIRCGFGM PAFNNDEIVI
PEFIKLGIEP QDAYDYAAIG CIETAVGGKW GYRCTGMSFI NFARVMLAAL EGGRDATSGK
VFLPQEKALS AGNFNNFDEV MAAWDTQIRY YTRKSIEIEY VVDTMLEENV HDILCSALVD
DCIERAKSIK QGGAKYDWVS GLQVGIANLG NSLAAVKKLV FEQGVIGQQQ LAAALADDFD
GLTHEQLRQR LINGAPKYGN DDDSVDTLLA RAYQTYIDEL KQYHNPRYGR GPVGGNYYAG
TSSISANVPF GAATMATPDG RKAHTPLAEG ASPASGTDHL GPTAVIGSVG KLPTGSILGG
VLLNQKLNPT TLENESDKQK LMVLLRTFFE VHKGWHIQYN IVSRETLLDA KKHPDQYRDL
VVRVAGYSAF FTALSPDAQD DIIARTEHML