Gene SNSL254_A0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0834 
Symbol 
ID6485247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp838768 
End bp839847 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content55% 
IMG OID642736246 
ProductABC transporter permease 
Protein accessionYP_002040006 
Protein GI194443543 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGTC AGGACAAATC ACTTTTAGCC CCCGGTTTCG CTTCCACGCC CGTCATTCCG 
CGCTATCGCC AGCTCATACG CAAACGGGCC GTGCTCATGT TAGCTATTGC GCTGGCGATG
ATGGCTTCAC TGATGGTGGA TGTAACCTGT GGGTCTTCTG GTTTACCGCT CAGTGCGCTG
TGGCAGGCGT TTTTTCAGCC GGAAAAGGTG AATGCGGGCA TACACGTTAT TGTCTGGGAT
ATCCGCTTAC CCTATGCCCT GATGGCCCTA CTGGTTGGCA TGGCGTTAGG GTTAGCGGGC
GCCGAAATGC AAACCATTTT AAATAATCCG CTGGCGACGC CGTTTACCCT CGGCGTATCG
TCCGCGGCGG CTTTTGGCGC TGCGCTGGCG ATTGTGCTGG GGATCGGTAT TCCCGGTATT
CCTGCCGCCT GGTTTATCCC GGCCAATGCG TTCATCTTTG CGCTTTTATC CGCGTTACTC
TTGGACGGTA TTACCCGTTG GACAGGCGTC GCCGCATCCG GAGTGGTGTT GTTCGGTATT
GCGCTGGTAT TCACCTTTAA CGCGTTGGTC GCCATTATGC AGTTTGTGGC TGATGAAGAT
ACGCTGCAGG GGCTGGTATT CTGGACGATG GGGAGCCTGG TCCGCGCGTC GTGGGAAAAA
TTGGGCGTAC TGGCCGTGGT GTTTATTGCT GTGCTTTTTT GCGCGTTACG AAGCGCCTGG
CAACTCACGG CATTACGTCT GGGCGAAGAG AGGGCGATGA GCTTTGGGAT TCATGTCCGC
CGTTTACGCC TGCTGTCATT GTTGCGTATC AGCTTGTTAT CAGCGCTGGC GGTAGCTTTC
GTCGGGCCGA TTGGTTTTAT TGGTCTCGTT GCACCGCACA TTGCACGAAT ACTGTTGGGG
GAAGATCACC GTTTCTACCT TCCGGGCAGC GTGCTGATAG GCGGGCTGGT GTTATCGCTG
GCCTCTATTG CGGCGAAAAA TAGTATTCCG GGCGTCATGG TGCCGGTGGG GATTGTCACC
TCGCTGGTCG GGGTTCCGTT CTTTTTAAGC ATTGTATTGC GACATCGGGG GAGTCTCTGA
 
Protein sequence
MTCQDKSLLA PGFASTPVIP RYRQLIRKRA VLMLAIALAM MASLMVDVTC GSSGLPLSAL 
WQAFFQPEKV NAGIHVIVWD IRLPYALMAL LVGMALGLAG AEMQTILNNP LATPFTLGVS
SAAAFGAALA IVLGIGIPGI PAAWFIPANA FIFALLSALL LDGITRWTGV AASGVVLFGI
ALVFTFNALV AIMQFVADED TLQGLVFWTM GSLVRASWEK LGVLAVVFIA VLFCALRSAW
QLTALRLGEE RAMSFGIHVR RLRLLSLLRI SLLSALAVAF VGPIGFIGLV APHIARILLG
EDHRFYLPGS VLIGGLVLSL ASIAAKNSIP GVMVPVGIVT SLVGVPFFLS IVLRHRGSL