Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0834 |
Symbol | |
ID | 6485247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 838768 |
End bp | 839847 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736246 |
Product | ABC transporter permease |
Protein accession | YP_002040006 |
Protein GI | 194443543 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGTC AGGACAAATC ACTTTTAGCC CCCGGTTTCG CTTCCACGCC CGTCATTCCG CGCTATCGCC AGCTCATACG CAAACGGGCC GTGCTCATGT TAGCTATTGC GCTGGCGATG ATGGCTTCAC TGATGGTGGA TGTAACCTGT GGGTCTTCTG GTTTACCGCT CAGTGCGCTG TGGCAGGCGT TTTTTCAGCC GGAAAAGGTG AATGCGGGCA TACACGTTAT TGTCTGGGAT ATCCGCTTAC CCTATGCCCT GATGGCCCTA CTGGTTGGCA TGGCGTTAGG GTTAGCGGGC GCCGAAATGC AAACCATTTT AAATAATCCG CTGGCGACGC CGTTTACCCT CGGCGTATCG TCCGCGGCGG CTTTTGGCGC TGCGCTGGCG ATTGTGCTGG GGATCGGTAT TCCCGGTATT CCTGCCGCCT GGTTTATCCC GGCCAATGCG TTCATCTTTG CGCTTTTATC CGCGTTACTC TTGGACGGTA TTACCCGTTG GACAGGCGTC GCCGCATCCG GAGTGGTGTT GTTCGGTATT GCGCTGGTAT TCACCTTTAA CGCGTTGGTC GCCATTATGC AGTTTGTGGC TGATGAAGAT ACGCTGCAGG GGCTGGTATT CTGGACGATG GGGAGCCTGG TCCGCGCGTC GTGGGAAAAA TTGGGCGTAC TGGCCGTGGT GTTTATTGCT GTGCTTTTTT GCGCGTTACG AAGCGCCTGG CAACTCACGG CATTACGTCT GGGCGAAGAG AGGGCGATGA GCTTTGGGAT TCATGTCCGC CGTTTACGCC TGCTGTCATT GTTGCGTATC AGCTTGTTAT CAGCGCTGGC GGTAGCTTTC GTCGGGCCGA TTGGTTTTAT TGGTCTCGTT GCACCGCACA TTGCACGAAT ACTGTTGGGG GAAGATCACC GTTTCTACCT TCCGGGCAGC GTGCTGATAG GCGGGCTGGT GTTATCGCTG GCCTCTATTG CGGCGAAAAA TAGTATTCCG GGCGTCATGG TGCCGGTGGG GATTGTCACC TCGCTGGTCG GGGTTCCGTT CTTTTTAAGC ATTGTATTGC GACATCGGGG GAGTCTCTGA
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Protein sequence | MTCQDKSLLA PGFASTPVIP RYRQLIRKRA VLMLAIALAM MASLMVDVTC GSSGLPLSAL WQAFFQPEKV NAGIHVIVWD IRLPYALMAL LVGMALGLAG AEMQTILNNP LATPFTLGVS SAAAFGAALA IVLGIGIPGI PAAWFIPANA FIFALLSALL LDGITRWTGV AASGVVLFGI ALVFTFNALV AIMQFVADED TLQGLVFWTM GSLVRASWEK LGVLAVVFIA VLFCALRSAW QLTALRLGEE RAMSFGIHVR RLRLLSLLRI SLLSALAVAF VGPIGFIGLV APHIARILLG EDHRFYLPGS VLIGGLVLSL ASIAAKNSIP GVMVPVGIVT SLVGVPFFLS IVLRHRGSL
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