Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0437 |
Symbol | |
ID | 6485362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 449298 |
End bp | 450470 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642735860 |
Product | MFS transport protein AraJ |
Protein accession | YP_002039634 |
Protein GI | 194442734 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAG TTATTTTTTC TTTGGCGCTG GGTACGTTCG GACTGGGGAT GGCCGAGTTT GGCATTATGG GCGTGCTGAC GGAGCTGGCA CTCGATGTCA GGATAACGAT TCCCGCCGCC GGGCATATGA TCTCGTTTTA CGCCTTCGGC GTCGTGCTGG GCGCTCCTGT AATGGCGCTC TTTTCCAGCC GCTTTTCGCT TAAACATATA CTGCTGTTTC TGGTCATACT GTGCGTGATG GGCAATGCCA TATTTACCTT TTCCTCGTCA TATCTGATGC TCGCCGTCGG CAGACTGGTT TCCGGCTTTC CGCACGGCGC CTTTTTTGGC GTCGGCGCCA TTGTCCTGTC AAAGATTATC CGCCCCGGGA AAGTCACCGC CGCCGTCGCG GGTATGGTTT CAGGGATGAC GGTGGCGAAT CTGGTGGGCA TTCCGTTCGG CACTTACCTG AGCCAGGAAT TTAGCTGGCG CTACACCTTT TTATTGATCG CGGTTTTCAA CATCGCCGTG CTCACCGCAA TTTTCTTCTG GGTGCCGGAT ATCCGTGACA AAGCCCAAGG CAGCCTGCGC GAGCAGTTCC ACTTCTTGCG TAGCCCCGCG CCGTGGCTCA TTTTCGCCGC CACGATGTTC GGCAATGCGG GCGTTTTTGC CTGGTTCAGC TATATCAAGC CATTTATGAT GTACATCTCC GGTTTTTCGG AGACGAGCAT GACGTTTATT ATGATACTGG TCGGGCTGGG GATGGTGTTA GGCAATCTGT TAAGCGGCAA ACTCTCCGGC AGATATACGC CGCTGCGCAT CGCGGTAGTG ACTGACCTCG TTATCGTGCT CTCTCTCATG GCGCTCTTTT TCTTCAGCGG ATACAAAACG GCATCGCTGA CTTTCGCGTT TATCTGCTGT GCTGGTCTGT TTGCGCTCTC TGCGCCGCTG CAAATCCTGC TGCTGCAAAA CGCCAAAGGC GGCGAACTGC TGGGCGCGGC GGGAGGACAA ATCGCGTTTA ATCTCGGTAG CGCGATTGGC GCCTGGTGCG GCGGGCTGAT GCTGACGCTA GGTTTTGCGT ACCACTACGT GGCGCTTCCC GCCGCCCTGC TCTCGTTTTC CGCCATGTCG TCGTTGCTGG TATACGGACG TCTAAAACAC AAGCAGCCAT CGGTCACGCC GGTTGCCGGA TGA
|
Protein sequence | MKKVIFSLAL GTFGLGMAEF GIMGVLTELA LDVRITIPAA GHMISFYAFG VVLGAPVMAL FSSRFSLKHI LLFLVILCVM GNAIFTFSSS YLMLAVGRLV SGFPHGAFFG VGAIVLSKII RPGKVTAAVA GMVSGMTVAN LVGIPFGTYL SQEFSWRYTF LLIAVFNIAV LTAIFFWVPD IRDKAQGSLR EQFHFLRSPA PWLIFAATMF GNAGVFAWFS YIKPFMMYIS GFSETSMTFI MILVGLGMVL GNLLSGKLSG RYTPLRIAVV TDLVIVLSLM ALFFFSGYKT ASLTFAFICC AGLFALSAPL QILLLQNAKG GELLGAAGGQ IAFNLGSAIG AWCGGLMLTL GFAYHYVALP AALLSFSAMS SLLVYGRLKH KQPSVTPVAG
|
| |