Gene SNSL254_A0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0320 
Symbol 
ID6482616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp335334 
End bp335780 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content52% 
IMG OID642735752 
Producthypothetical protein 
Protein accessionYP_002039527 
Protein GI194445631 
COG category[S] Function unknown 
COG ID[COG5435] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.726183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0158521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAC CATACCGCAT ACAGGAAGGG TGTTTTGTCC TGCCTGAAAC ATTTACGGAT 
CGCAGCGTCA ATATTTTTAT CCTGGAGGGC AATGAACGAA CATCGCCCAG CCTGAATATT 
TCCCGCGATA CGCTAAAACC TGATGAAGAC CTGCCCGCCT ATATTGACCG CCAGATTGCG 
CTGATGAAAA AAAATCTCGG TCAGCACCGG GTATTGTCGC GAGCGCCTGC ACAGGCAGGA 
ACGGGCAATG ATGCCCTGAT GGGGGAACAA ATTGCCGCCA CCCATAAATC CGGGAAAACG 
GAAGTGTACC AGCGTCAGGC CGGGTTTATT GCAACCCCTG GCAAGGTACT GGTCTTCACC 
CTGACCAGTC CCCGTCCTTT TGATGATAAA GCAGACCTGC TCTGGAACAC CTGGCTGGCA 
GGCTTTCAGC CGGATAAAAA CGAATAA
 
Protein sequence
MDRPYRIQEG CFVLPETFTD RSVNIFILEG NERTSPSLNI SRDTLKPDED LPAYIDRQIA 
LMKKNLGQHR VLSRAPAQAG TGNDALMGEQ IAATHKSGKT EVYQRQAGFI ATPGKVLVFT 
LTSPRPFDDK ADLLWNTWLA GFQPDKNE