Gene Smal_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_4018 
Symbol 
ID6474912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4546264 
End bp4546788 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID642733231 
ProductMammalian cell entry related domain protein 
Protein accessionYP_002030400 
Protein GI194367790 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.129238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.186584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCC GCGGTCCCAG ACTTGAATTC TCTGTCGGCG CTTTCCTGCT GCTGGCCCTG 
GCCTCGCTGA TGGTGCTGGC CGTGGCCTCG ACCAACCAGC GCTGGAGCTG GGGTGGCGAA
GGCTATGAAC TCAAGGCCCG TTTCTCCCAG GTCGGCCAGC TGCGCAAGCA GGCGCCGGTG
AAGATCGGCG GCGTCACCGT TGGCCAAGTC GCCGCGATCG ACCTGGACCC GGTGAAGTTC
GAATCGATCG TGACCCTGCG CATGGACAGC AAGGTCAAGG ATCTGCCGGC CGACACTTCC
GCCGGCATCT TCACCAGTGG TTTGCTGGGC GAGAGCTATA TCGGTCTTCA GCCCGGCGGC
GATCCGGACG TGCTCAAGCC CGGTGAGGAG ATCGTCTTCA CCCAGCCGGC GGTGGACCTG
ATCCAGCTGG TCGGCAAATA CATGTTCAGT GGCGGCGCCG GTGGCGGCGC TGCTCCGAAG
CCCAACGATG GCGCGCAGGC GCCTGCAACG GAACCGCAAC CATGA
 
Protein sequence
MAIRGPRLEF SVGAFLLLAL ASLMVLAVAS TNQRWSWGGE GYELKARFSQ VGQLRKQAPV 
KIGGVTVGQV AAIDLDPVKF ESIVTLRMDS KVKDLPADTS AGIFTSGLLG ESYIGLQPGG
DPDVLKPGEE IVFTQPAVDL IQLVGKYMFS GGAGGGAAPK PNDGAQAPAT EPQP