Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_4018 |
Symbol | |
ID | 6474912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4546264 |
End bp | 4546788 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642733231 |
Product | Mammalian cell entry related domain protein |
Protein accession | YP_002030400 |
Protein GI | 194367790 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.129238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.186584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCC GCGGTCCCAG ACTTGAATTC TCTGTCGGCG CTTTCCTGCT GCTGGCCCTG GCCTCGCTGA TGGTGCTGGC CGTGGCCTCG ACCAACCAGC GCTGGAGCTG GGGTGGCGAA GGCTATGAAC TCAAGGCCCG TTTCTCCCAG GTCGGCCAGC TGCGCAAGCA GGCGCCGGTG AAGATCGGCG GCGTCACCGT TGGCCAAGTC GCCGCGATCG ACCTGGACCC GGTGAAGTTC GAATCGATCG TGACCCTGCG CATGGACAGC AAGGTCAAGG ATCTGCCGGC CGACACTTCC GCCGGCATCT TCACCAGTGG TTTGCTGGGC GAGAGCTATA TCGGTCTTCA GCCCGGCGGC GATCCGGACG TGCTCAAGCC CGGTGAGGAG ATCGTCTTCA CCCAGCCGGC GGTGGACCTG ATCCAGCTGG TCGGCAAATA CATGTTCAGT GGCGGCGCCG GTGGCGGCGC TGCTCCGAAG CCCAACGATG GCGCGCAGGC GCCTGCAACG GAACCGCAAC CATGA
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Protein sequence | MAIRGPRLEF SVGAFLLLAL ASLMVLAVAS TNQRWSWGGE GYELKARFSQ VGQLRKQAPV KIGGVTVGQV AAIDLDPVKF ESIVTLRMDS KVKDLPADTS AGIFTSGLLG ESYIGLQPGG DPDVLKPGEE IVFTQPAVDL IQLVGKYMFS GGAGGGAAPK PNDGAQAPAT EPQP
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